SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MZA15.17 (Universal genetic code) : 300 aa
 vs  library
 searching pir::S55056 library

    312 residues in     1 sequences
The best scores are:                              s-w
pir||S55056                                        (312) 783

>>pir||S55056                                        (312 aa)
Smith-Waterman score: 783;   41.667% identity in 300 aa overlap

               10        20        30        40        50        60
MZA15. MADAWKDLASGTVGGAAQLVVGHPFDTIKVKLQSQPTPAPGQLPRYTGAIDAVKQTVASE
       :.:.  .. .: :::.  ..:::::::.::..:..: : ::. :..:::.: ::.::..:
pir||S MSDVLLNFIAGGVGGSCTVIVGHPFDTVKVRIQTMPMPKPGEKPQFTGALDCVKRTVSKE
               10        20        30        40        50        60

               70        80        90         100       110        
MZA15. GTKGLYKGMGAPLATVAAFNAVLFTVRGQMEG--LLRSEAGVPLTISQQFVAGAGAG-FA
       :  .:::::.:::. :. . ::.:   :   :  : ... .  .:. :.  ::: :: :.
pir||S GFFALYKGMAAPLVGVSPLFAVFFG--GCAVGKWLQQTDPSQEMTFIQNANAGALAGVFT
               70        80          90       100       110        

       120       130       140       150       160       170       
MZA15. VSFLACPTELIKCRLQAQGALAGASTTSSVVAAVKYGGPMDVARHVLRSEGGARGLFKGL
        ...  : : ::: ::.: :  : :. :.:    .: ::.::... : ..::  ....: 
pir||S -TIVMVPGERIKCLLQVQQA--G-SAGSGV----HYDGPLDVVKK-LYKQGGISSIYRGT
       120       130          140           150        160         

       180       190       200        210       220       230      
MZA15. FPTFAREVPGNATMFAAYEAFKRFLAG-GSDTSSLGQGSLIMAGGVAGASFWGIVYPTDV
         :. :..:..:.....:: .:. ..: :.. . :. :. .::::.:: . ::.  :.::
pir||S GATLLRDIPASAAYLSVYEYLKKKFSGEGAQRT-LSPGATLMAGGLAGIANWGVCIPADV
     170       180       190       200        210       220        

        240        250       260       270       280       290     
MZA15. VKSVLQV-DDYKNPRYTGSMDAFRKILKSEGVKGLYKGFGPAMARSVPANAACFLAYEMT
       .:: ::.  . : :   :   ..:..:. :: ..:.::: :.: :. :::::::.. :.:
pir||S LKSRLQTAPEGKYP--DGIRGVLREVLREEGPRALFKGFWPVMLRAFPANAACFFGLELT
      230       240         250       260       270       280      

         300                     
MZA15. RSSLG                     
                                 
pir||S LAAFRYFGIGGHPTPSTEVVPLPHDE
        290       300       310  

Library scan:  0:00:00  total CPU time:  0:00:00