SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MXH1.P3 (Universal genetic code) : 57 aa
 vs  library
 searching atzap1 library

    463 residues in     1 sequences
The best scores are:                              s-w
ATZAP1, 463 bases, CB7 checksum.                   (463) 285

>>ATZAP1, 463 bases, CB7 checksum.                   (463 aa)
Smith-Waterman score: 285;   71.930% identity in 57 aa overlap

ATZAP1 MAEVGKVLASDMELDHSNETKAVDDVVATTDKAEVIPVAVTRTETVVESLESTDCKELEK
               10        20        30        40        50        60

ATZAP1 LVPHTVASQSEVDVASPVSEKAPKVSESSGALSLQSGSEGNSPFIREKVMEDGYNWRKYG
               70        80        90       100       110       120

ATZAP1 QKLVKGNEFVRSYYRCTHPNCKAKKQLERSAGGQVVDTVYFGEHDHPKPLAGAVPINQDK
              130       140       150       160       170       180

ATZAP1 RSDVFTAVSKEKTSGSSVQTLRQTEPPKIHGGLHVSVIPPADDVKTDISQSSRITGDNTH
              190       200       210       220       230       240

ATZAP1 KDYNSPTAKRRKKGGNIELSPVERSTNDSRIVVHTQTLFDIVNDGYRWRKYGQKSVKGSP
              250       260       270       280       290       300

                10        20        30        40         50        
MXH1.P  IRSYYRCSSSGCAVKKQVERSSCDAKLLITTYEGKHDHDMPPGRTFAHK-ILKQGIDE 
         :::::::: :: :::.::::: :.:::::::::::::::::::. .:. .: . .:. 
ATZAP1 YPRSYYRCSSPGCPVKKHVERSSHDTKLLITTYEGKHDHDMPPGRVVTHNNMLDSEVDDK
              310       320       330       340       350       360

ATZAP1 EGDANKTPQSSTLQSITKDQHVEDHLRKKTKTNGFEKSLDQGPVLDEKLKEEIKERSDAN
              370       380       390       400       410       420

ATZAP1 KDHAANHAKPEAKSDDKTTVCQEKAVGTLESEEQKPKTEPAQS
              430       440       450       460   

Library scan:  0:00:00  total CPU time:  0:00:00