SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MXH1.P2 (Universal genetic code) : 149 aa
 vs  library
 searching s65812 library

   1333 residues in     1 sequences
The best scores are:                              s-w
S65812, 1333 bases, 1133 checksum.                 (1333) 450

>>S65812, 1333 bases, 1133 checksum.                 (1333 aa)
Smith-Waterman score: 450;   40.306% identity in 196 aa overlap

S65812 MSLVSWNCQGLGWSQDLTIPRLMEMRLSHFPEVLFLMETKNCSNVVVDLQEWLGYERVFT
               10        20        30        40        50        60

S65812 VNPIGLSGGLALFWKKGVDIVIKYADKNLIDFQIQFGSHEFYVSCVYGNPAFSDKHLVWE
               70        80        90       100       110       120

S65812 KITRIGINRKEPWCMLGDFNPILHNGEKRGGPRRGDSSFLPFTDMLDSCDMLELPSIGNP
              130       140       150       160       170       180

S65812 FTWGGKTNEMWIQSRLDRCFGNKNWFRFFPISNQEFLDKRGSDHRPVLVRLTKTKEEYRG
              190       200       210       220       230       240

S65812 NFRFDKRLFNQPNVKETIVQAWNGSQRNENLLVLDKLKHCRSALSRWKKENNINSSTRIT
              250       260       270       280       290       300

S65812 QARAALELEQSSGFPRADLVFSLKNDLCKANHDEEVFWSQKSRAKWMHSGDKNTSFFHAS
              310       320       330       340       350       360

S65812 VKDNRGKQHIDQLCDVNGLFHKDEMNKGAIAEAYFSDLFKSTDPSSFVDLFEDYQPRVTE
              370       380       390       400       410       420

S65812 SMNNTLIAAVSKNEIREAVFAIRSSSAPGVDGFTGFFFQKYWSIICLQVTKEIQNFFLLG
              430       440       450       460       470       480

S65812 YFPKSWNFTHLCLLPKKKKPDKMTDLRPISLCSVLYKIISKIMVRRLQPFLPDLVSPNQS
              490       500       510       520       530       540

S65812 AFVAERLIFDNILIAHEVVHGLRTHKSVSKGFIAIKSNMSKAFDRVEWNYVRALLDALGF
              550       560       570       580       590       600

S65812 HQKWVGWIMFMISSVSYSVLINDKAFGNIVPSRGLRQGDPLSPFLFVLCSEGLTHLMNRA
              610       620       630       640       650       660

S65812 ERQGLLSGIRFSENGPAIHHLLFADDSLFMCKAVKEEVTVIKSIFKVYGDVTGQRINYDK
              670       680       690       700       710       720

S65812 SSITLGALVDEDCKVWIQAELGITNEGGASTYLGLPECFSGSKVQLLDYIKDRLKTRLSG
              730       740       750       760       770       780

S65812 WFARTLSMGGKETLLKAFALALLFYAMSCFKLTKTTCVNMTSAMSDFWWNALEHKRKTHW
              790       800       810       820       830       840

S65812 VSCEKMCLSKENGGLGFRDIESFNQALLAKQAWRLLQFPNSLFARFFKSRYYDEEDFLDA
              850       860       870       880       890       900

S65812 ELKATPSYAWRSILHGRDLLIKGFRKKVGNGSSTSVWMDPWIYDNDPRLPLQKHFSVNLD
              910       920       930       940       950       960

S65812 LRVHDLINVEDRCRRRDRLEELFYPADIEIIVKRNPVVSMDDFWVWLHSKSGEYSVKSGY
              970       980       990      1000      1010      1020

S65812 WLAFQTNKPELIREARVQPSTNGLKEKIWSTLTSPKIKLFLWRILSSALPVAYQIIRRGM
             1030      1040      1050      1060      1070      1080

                    10        20        30         40        50    
MXH1.P      CLMCGKEKETINYIMFQCLLARQIWALSLIPSPSNGFR-SSIFTNMCYMLDMSKN
            : .::.: :.::...: : ::::.:::: .:. . ::. ::::.:. :.:.. :.
S65812 PIDPRCQVCGEEGESINHVLFTCSLARQVWALSGVPTSQFGFQNSSIFANIQYLLEL-KG
             1090      1100      1110      1120      1130          

            60         70        80        90                      
MXH1.P PCLTP-HIKDIS-PWVLWALWKNINKNLFKGCLKWSPLKH--------------------
         : : .::  : ::::: :::: .: .:.: . .::::                     
S65812 KGLIPEQIKK-SWPWVLWRLWKNRDKLFFEGTI-FSPLKSIEKIRDDVQEWFLAQALVAS
    1140       1150      1160      1170       1180      1190       

                                  100       110       120       130
MXH1.P ---GD---------------L---KCNI-GFAWSKQQHISGASWVVRNSHGSVLLHSIRS
          :.               :   :::: : .:: .... :..::.:..::.::::: :.
S65812 VDAGETVCSAPCPSSWEPPPLGWVKCNISG-VWSGKKRVCGGAWVLRDDHGKVLLHSRRA
      1200      1210      1220       1230      1240      1250      

               140                                                 
MXH1.P FTQVYSIF-DAKFRSC-EWAL                                       
       :... :.  :: :  : .:::                                       
S65812 FSNL-SVKKDALF-CCVKWALRVCLATDSLRFCLLLSLGLTVRFCQAESLALFCFSCFRT
       1260        1270      1280      1290      1300      1310    

S65812 NSFFGEDWRLEGLGGKGRF
         1320      1330   

Library scan:  0:00:00  total CPU time:  0:00:00