SSEARCH searches a sequence database using the Smith-Waterman algorithm version 2.0u54, July. 1996 Please cite: T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; W.R. Pearson (1991) Genomics 11:635-650 >MXH1.11 (Universal genetic code) : 1042 aa vs library searching s75142 library 1462 residues in 1 sequences The best scores are: s-w S75142, 1462 bases, A4D checksum. (1462)1145 >>S75142, 1462 bases, A4D checksum. (1462 aa) Smith-Waterman score: 1145; 29.227% identity in 1112 aa overlap S75142 MVISATVISMKSPLRRLLLSPVLPILIGAGLSVMTVHTWLFLYNQVQERLKQVLTNRLTN 10 20 30 40 50 60 S75142 IHEQIENQLNIHVRQLEQMAGRWERSPTGTEQTDWRLDARAQAEGFDGYQTIQWVDPKFV 70 80 90 100 110 120 S75142 VRWVEPLPDDEHDIDYANQYPHQIQSLELAARQKNTILSGVVDLDQGEKGFLVYVPLFIG 130 140 150 160 170 180 S75142 DRFDGFVVGVFQLDQFIGSVRPLSGNKPDQDSGLRSFGLRIFEGNQLIYNDVPDDWEQDI 190 200 210 220 230 240 S75142 VVTQELAWANSLPQAEAMTSRWQLQLVPGPILLDQYGSSQWILFSGLLMAWAVAIAVYYL 250 260 270 280 290 300 S75142 QKSSKHSEQLSESIKQQQKVEEFLKSTLQELAVQKTALDEAAIVAITDTEGVITYVNDKF 310 320 330 340 350 360 10 20 MXH1.1 MSITCELLNLTSKKAKKSSSSDKKW ...:: ... : S75142 VEVSGYSREELIGNTHRLVSSGYHSPEFFQQFWQTIRAGKVWHGQINNRAK---AGNTYW 370 380 390 400 410 30 40 50 60 70 80 MXH1.1 LKKPLF-FLILCGSLVIVLVMFLRLGRSQKEETDSCNGEEKVLYRHQNVTRSEIHDLVSL . . . :: :. :.. ... :.. : : : .. .: . : : : :. S75142 VDSTVVPFLDDNGNPYQYLAIRFEITSSKQAEK-SLR-ESEARFRMMADT-SPIMLWVA- 420 430 440 450 460 470 90 100 110 120 130 140 MXH1.1 FSDSDQVTSFECHKESSPGMWTNY-GITCSLSVRSDKQETRGL-PWNLGLGHSISSTSCM :.:. .: ..: : .. : : :. .: . .:. : . : : .. : S75142 --DQDKKMTFV--NQS----WLEFRGAT--LAEESGNGYLEGIHPDDKG--HYLGVYSQA 480 490 500 510 520 150 160 170 180 190 MXH1.1 CGNLEPRTFE-EYT-ERTNFE-RPLTSGVAYALKVPHSEREKFEKEHGWAIKKMETEDQT :. : :: :: .:.. . : ... :. :: : . : : : : S75142 FGDR--RRFELEYRYRRVDQQYRWIVN-VG----VP---R--YL-EDG---KFM-----G 530 540 550 560 200 210 220 230 240 250 MXH1.1 VVQDCVPENFDPAPIQDEYAPVIFAQETVSHIVSVDMMSGEEDRENILRARASGKGVLTS : .:. . : :: :. :. ...:. .: . ..: .: : : . .: S75142 YVGSCL-DITDRKQAQD-----IL-QKKLNQIL---LMR-KISQE--IR-R-SLQPTLI- 570 580 590 600 260 270 280 290 300 310 MXH1.1 PFKLLKSNHLGVVLTFAVYDTSLPPDATEEQRVEATI--GYLGASYDMPSLVEKLLHQLA :. . ..: : ::: . : . .: ... . :::... :: :: S75142 -FQT-AARQVGNV--FAV-SRCLIHNYSEATTLQVPVVAEYLGGQFT--SL-------LA 610 620 630 640 650 320 330 340 350 360 MXH1.1 SKQTIAVD-VYDTTNTSGLIKMYGSEIG-DISEQHISSL--DFGDPS----R-NHE---- .. :::. .:: : .: : .. :.. : ... : : : ... S75142 GE--IAVEQAYDPTIIQGDRAMAVVDLDQDLNSTHTKAFYQRFQVKSFLAVRTSYQGKAN 660 670 680 690 700 370 380 390 400 410 MXH1.1 ----MH-CRFKHKLPIPWTAITPSILVL-VITFLVGYILYEAINRIATVEEDCQKMREL- .: : .... ::: : .: .:. .: : .: : .:.. .. ::: S75142 GIIALHQCD-RQRV---WTA--DEIELLEAIAEQMGIALAQA----ALLEKERERRRELA 710 720 730 740 750 420 430 440 450 460 MXH1.1 -------KAR--AEAADIAKSQFLATVSHEIRTPMNGVLGTFSTYPWSILHVLLKSAETF :: ::::. ::..::: .:::::::::::.: S75142 QKNLELEKATWAAEAANRAKGEFLAMMSHEIRTPMNGVIG-------------------- 760 770 780 790 470 480 490 500 510 520 MXH1.1 KHFVTGMLKMLMDTDLDAKQMDYAQTAHGSGKDLTSLINEVLDQAKIESGRLELENVPFD : ..:. :::. .:.::.:: . ::. : ..::..:: .:::. .: ::. :. S75142 ------MTELLIMTDLNLQQLDYVQTIRQSGETLLTIINDILDFSKIEADKLVLETQAFE 800 810 820 830 840 850 530 540 550 560 570 580 MXH1.1 MRFILDNVSSLLSGK-ANEKGIELAVY-VSSQVPDVVVGDPSRFRQIITNLVGNSIKFTQ .: ....: .. : : : .::. : .. :.: ..:: :.:::..::.::..::: S75142 LRPLIETVLEMF-GPIARAKHLELT-YGIDPQTPARILGDQVRLRQILSNLIGNALKFT- 860 870 880 890 900 590 600 610 620 630 640 MXH1.1 ERGHIFISVHLADEVKEPLTIEDAVLKQRLALGCSESGETVSGFPAVNAWGSWKNFKTCY :.:.. ..:. ::. : : :: .:. ..: . . :. S75142 EKGEVVLTVK-----GEPF---DP------A----ESYHTILNLPH-------PSHRICF 910 920 930 940 650 660 670 680 690 700 MXH1.1 STESQNSDQIKLLVTVEDTGVGIPVDAQGRIFTPFMQADSSTSRTYGGTGIGLSISKRLV : : .:::.:::.: : :.: : :.::::.: :::::.:: ::.::. S75142 -----N------L---RDTGIGIPLDRQDRLFKSFSQVDSSTTRKYGGTGLGLVISQRLT 950 960 970 980 990 710 720 730 740 750 760 MXH1.1 ELMQGEMGFVSEPGIGSTFSFTGVFGKAETNTSITKLERFDLAIQEFTGLRALVIDNRNI ..: : . .::::.::.: : .. :... : . : ..:.. : ..:..:. : S75142 QMMGGVLTVTSEPGVGSNFRFC-IL----TTAQAPALAEAD-SVQQMKGKQVLIVDD-N- 1000 1010 1020 1030 1040 770 780 790 800 810 MXH1.1 RAEVTRYELRRLGISADIVSSLRMACTCCIS---KLE------NL-AMILIDKDAWNKEE :.. :: : : .. ..: : : :. .: : :: : . : . S75142 --ETN----RR--ILQDQCQAWGLVCHCFTSGESALDWFARCPDLDAAIL-DLQMPNMDG 1050 1060 1070 1080 1090 820 830 840 850 860 870 MXH1.1 FSVLDEL--FTRSKVTFTRVPKIFLLATSATLTERSEMKSTGLIDEVVIKPLRMSVLICC ... .: :...: .: :.:: .:. .. .:. : ... :. ::.:.: :: S75142 ITLAHHLRQFAQGK----DLP-IILL-SSGLVAGADEL-S--VFQTVLNKPVRQS-LIF- 1100 1110 1120 1130 1140 880 890 900 910 MXH1.1 LQETLVN---GK----KRQPNRQRRNL------GHLL-REK---------QILVVDDNLV ..::: :. :. .. .: : : : :::...:::: S75142 --DSLVNIFQGSIGLADYAPQFDQLDLPEFVPDGDGLPTEDNATSLQPALQILLAEDNLV 1150 1160 1170 1180 1190 1200 920 930 940 950 960 MXH1.1 NRRVAEGALKKYGAIVTCVESGKAALAMLKPPHNFDACFMDLQMPEMDGFEATRRVRE-- :..::. :.. : :. ...:. .. :. .: .::.::: :::. : :..:. S75142 NQKVAHQMLNNLGYPVAIANNGQEVIDALEKKF-YDLVLMDMQMPVMDGITACRHIRQTL 1210 1220 1230 1240 1250 970 980 990 1000 1010 1020 MXH1.1 -LEREINKKIASGEVSAEMFCKFSSWHVP-ILAMTADVIQATHEECMKCGMDGYVSKPFE :::. : :.::::... . ..::. :::::.:::. S75142 PLERQ-----------------------PRIVAMTANAMPGDRQECLDAGMDGYISKPIS 1260 1270 1280 1290 1030 1040 MXH1.1 ----EEVLYTAVARFFEPC ..:: . : . : S75142 INQLRKVLQDTSALITSPQAREDIVTLGDKITVVEEQTMVKPTDVTESPLDPTAIAFLRD 1300 1310 1320 1330 1340 1350 S75142 DLCGGDLTLFGEMVACYCQESQKLIEELVQGLEVDDFAVIRRTAHSLKSSSASLGAQQLS 1360 1370 1380 1390 1400 1410 S75142 TFCQQLEKNAGSGNLGLGSPPQLVDRCRQLHIAVVEALAPFTIPSP 1420 1430 1440 1450 1460 Library scan: 0:00:01 total CPU time: 0:00:07