Gene organization of MXC9 (79590 bp)
Chromosome V 4-6 Mb   FTP   Reference   Kazusa Status  
Gene organization of MXC9
figure legend

potential protein genes

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MXC9.1
-
6689..8290 5 0 hypothetical protein homolog MJ0170
MXC9.2
-
13485..17557 4 0 Transposon MAGGY gag and pol gene homologues
MXC9.3
+
18147..19378 2 0 chromosome II BAC T06D20 genomic sequence
MXC9.4
+
19892..22339 1 1 Sequence of BAC F21M12 from chromosome 1
MXC9.5
+
22987..24233 6 0 elongation factor 1-beta
MXC9.6
-
24736..26592 1 4 protein prospero
MXC9.7
+
28348..30626 10 0 00107
MXC9.8
-
31802..32440 2 4 cysteine proteinase inhibitor
MXC9.9
-
32900..34231 6 1 chromosome 16 BAC clone CIT987SK-815A9
MXC9.10
+
45640..47824 7 0 calcium-dependent protein kinase gene, exons 1-7
MXC9.11
-
50207..53231 12 2 Human dihydropyrimidinase
MXC9.12
+
56009..58096 7 0 geranylgeranyl transferase type II beta subunit (EC 2.5.1.-)
MXC9.13
+
58722..61515 7 0 las1 protein
MXC9.14
-
69824..71475 3 3 tubulin beta-6 chain


potential exons

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MXC9.P1
-
78665..79096 1 0 ethylene-forming enzyme (EFE)


transcribed regions

identifier direction position Definition of the most similar sequence

MXC9.T1
-
9837..10023 CD4-16 cDNA clone H7H7T7
MXC9.T2
-
34985..35290 clone 170J8T7
MXC9.T3
-
35643..36100 clone 108P20T7
MXC9.T4
+
41260..41707 Lambda-PRL2 cDNA clone 91C20T7
MXC9.T5
+,-
42990..43589 clone OBO180; 5' end
clone OBO180; 3' end
MXC9.T6
-
63343..63652 clone 188F21T7
MXC9.T7
-
64412..64633 clone 105J12T7


Reference
Structural Analysis of Arabidopsis thaliana Chromosome 5. III. Sequence Features of the Regions of 1,191,918 bp Covered by Seventeen Physically assigned P1 Clones. (1997) Yasukazu Nakamura, Shusei Sato, Takakazu Kaneko, Hirokazu Kotani, Erika Asamizu, Nobuyuki Miyajima, and Satoshi Tabata DNA Research, 4, 401-414
o Kazusa Status