Gene organization of MWD9 (85421 bp)
Chromosome V 6-8 Mb   FTP   Reference   Kazusa Status  
Gene organization of MWD9
figure legend

potential protein genes

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MWD9.1
-
4538..5371 1 1 mCAF1 protein
MWD9.2
-
14977..16383 4 2 NAM gene
MWD9.3
+
18331..20691 6 0 nitrilase 4 (EC 3.5.5.1)
MWD9.4
-
22675..24275 2 1 myosin II heavy chain, non muscle
MWD9.5
-
27108..29356 10 2 64.6 kD protein in tor2-pas1 intergenic region
MWD9.6
-
29959..33001 12 0 hypothetical protein YDR190c
MWD9.7
+
40692..42683 1 0 chromosome II BAC T29M21 genomic sequence
MWD9.8
-
43734..44584 3 1 synaptobrevin-like protein
MWD9.9
+
45517..47305 9 1 probable membrane protein YOR262w
MWD9.10
-
47857..48968 3 2 ATAF1 protein
MWD9.11
-
57316..57921 1 0 herpes-like virus ORF73 homolog
MWD9.12
-
61983..64265 5 1 hypothetical 143.6 kD protein c26a3.09c in chromosome I
MWD9.13
+
65277..66649 4 1 peroxidase ATP14a
MWD9.14
+
68833..71513 10 0 male sterility 2-like protein
MWD9.15
-
74261..75416 5 4 60s ribosomal protein L10a
MWD9.16
-
82592..84199 4 2 cosmid I364 region


potential exons

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MWD9.P1
+
332..3047 13 0 E2F-3 transcription factor
MWD9.P2
-
6670..6807 1 0 mitochondrial genome, part A
MWD9.P3
-
7741..8022 1 0 mitochondrial genome, part A


transcribed regions

identifier direction position Definition of the most similar sequence

MWD9.T1
-
11247..11748 clone 90A14T7
MWD9.T2
+
13385..13544 clone 179O2T7
MWD9.T3
-
36553..37224 clone 202K19T7
clone 197D22T7
clone 199D22T7
MWD9.T4
+
42971..43370 clone VBV11-5992
MWD9.T5
+
73177..73807 Lambda-PRL2 cDNA clone 143D1XP 3'
clone 143D1T7
MWD9.T6
-
75861..76345 Lambda-PRL2 cDNA clone 109D21XP 3'
Lambda-PRL2 cDNA clone 97O6XP 3'
MWD9.T7
-
77549..78017 clone 97O6T7
clone 109D21T7


potential RNA genes

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MWD9.R1
+
26818..26889 1 0 tRNA-Gln(CUG)


Reference
Structural Analysis of Arabidopsis thaliana Chromosome 5. III. Sequence Features of the Regions of 1,191,918 bp Covered by Seventeen Physically assigned P1 Clones. (1997) Yasukazu Nakamura, Shusei Sato, Takakazu Kaneko, Hirokazu Kotani, Erika Asamizu, Nobuyuki Miyajima, and Satoshi Tabata DNA Research, 4, 401-414
o Kazusa Status