Gene organization of MVA3 (81701 bp)
Chromosome V 6-8 Mb   FTP   Reference   Kazusa Status  
Gene organization of MVA3
figure legend

potential protein genes
identifier direction position No. of
exon		 No. of
EST		 Definition of the most similar sequence
MVA3.1
-
1031..2965 6 1 Synechocystis sp. PCC6803 sll1300 (hypothetical protein)
MVA3.2
+
5249..9400 4 0 TMV resistance protein N
MVA3.3
-
13439..15665 7 1 A.thaliana mRNA from chromosome III
MVA3.4
-
21813..23084 3 1 Synechocystis sp. PCC6803 sll0057 (heatshock protein GrpE)
MVA3.5
+
28313..30381 5 0 lipase 1 precursor (EC 3.1.1.3)
MVA3.6
-
30549..32751 2 0 reverse transcriptase
MVA3.7
-
49682..50989 4 0 lipase 1 precursor (EC 3.1.1.3)
MVA3.8
-
52063..53160 1 0 iols protein
MVA3.9
-
70448..72351 3 6 A.thaliana peroxidase ATP13a, EST clone 124F2T7

potential exons
identifier direction position No. of
exon		 No. of
EST		 Definition of the most similar sequence
MVA3.P2
-
34751..35616 2 0 Thermoplasma acidophilum VCP-like ATPase
MVA3.P3
-
38488..40236 2 0 Thermoplasma acidophilum VCP-like ATPase
MVA3.P4
-
40948..42017 2 0 Thermoplasma acidophilum VCP-like ATPase
MVA3.P5
-
42841..43903 2 1 Thermoplasma acidophilum VCP-like ATPase
MVA3.P6
-
46796..48436 8 2 NADH-cytochrome b5 reductase (EC 1.6.2.2)
MVA3.P7
+
59497..60587 2 0 myb-related protein a

transcribed regions
identifier direction position Definition of the most similar sequence
MVA3.T1
-
448..597 clone 190F20T7
Lambda-PRL2 cDNA clone 85D7T7
MVA3.T2
+
3707..3851 clone OAO159; 5' end
MVA3.T3
+
4626..4921 clone OAO159; 3' end

Reference
Structural Analysis of Arabidopsis thaliana Chromosome 5. II. Sequence Features of the Regions of 1,044,062 bp Covered by Thirteen Physically assigned P1 Clones. (1997) Hirokazu Kotani, Yasukazu Nakamura, Shusei Sato, Takakazu Kaneko, Erika Asamizu, Nobuyuki Miyajima, and Satoshi Tabata DNA Research, 4, 291-300
o Kazusa Status