SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MUF9.9 (Universal genetic code) : 272 aa
 vs  library
 searching ybl2_yeast library

    286 residues in     1 sequences
The best scores are:                              s-w
YBL2_YEAST, 286 bases, 1E2F checksum.              (286) 606

>>YBL2_YEAST, 286 bases, 1E2F checksum.              (286 aa)
Smith-Waterman score: 606;   37.597% identity in 258 aa overlap

               10        20         30         40        50        
MUF9.9 MNNTREEVGEFTQIFNALMSLMRKFIF-KVLRVGP-IPTNISFIMDGNRRFAKKRNLEGL
                              : :: ..::..  .: ...::::::::::.:.... .
YBL2_Y       METDSGIPGHSFVLKWTKNIFSRTLRASNCVPRHVGFIMDGNRRFARKKEMD-V
                     10        20        30        40        50    

       60        70        80        90       100       110        
MUF9.9 DAGHRAGFISVKYILQYCKEIGVPYVTLYAFGMDNFKRGPEEVKCVMDLMLEKVELTIDQ
         ::.:::.:.. ::. : : ::  .:..::...::::. .::. .: :  :...  : .
YBL2_Y KEGHEAGFVSMSRILELCYEAGVDTATVFAFSIENFKRSSREVESLMTLARERIR-QITE
            60        70        80        90       100        110  

      120          130       140       150       160       170     
MUF9.9 AVSGNMN---GVRIIFAGDLNSLNERFRAATKKLMELTEENRDLIVVVCVAYSTSVEIVH
          :..    :::: . :::. :.. .   ..  .: :..:.   . .:  :.   ::.:
YBL2_Y --RGELACKYGVRIKIIGDLSLLDKSLLEDVRVAVETTKNNKRATLNICFPYTGREEILH
              120       130       140       150       160       170

         180       190       200       210        220       230    
MUF9.9 AVRDSCVRKSKTGDGSSALELSDIEECMYTSVVPVP-DLVVRTGGGDRLSNFMTWQ-TSR
       :.... :...:   :. :.. : .:  .::. :: : ::..::.: .:::.:. :: .:.
YBL2_Y AMKETIVQHKK---GA-AIDESTLESHLYTAGVP-PLDLLIRTSGVSRLSDFLIWQASSK
              180           190       200        210       220     

           240          250       260       270                    
MUF9.9 ALLHRTE---ALWPELGLWHLVWAILKFQRMQDYLQKKKKLH                  
       ..  : :    ::::.:  ...: .:::.  ...:.:. .:.                  
YBL2_Y GV--RIELLDCLWPEFGPIRMAWILLKFSFHKSFLNKEYRLEEGDYDEETNGDPIDLKEK
           230       240       250       260       270       280   

YBL2_Y KLN
          

Library scan:  0:00:00  total CPU time:  0:00:00