SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MUA2.9 (Universal genetic code) : 532 aa
 vs  library
 searching atu27609 library

    284 residues in     1 sequences
The best scores are:                              s-w
ATU27609, 284 bases, 26F1 checksum.                (284)1890

>>ATU27609, 284 bases, 26F1 checksum.                (284 aa)
Smith-Waterman score: 1890;   100.000% identity in 276 aa overlap

               10        20        30        40        50        60
MUA2.9 MAITYLLPLFLSLIITSSVSANFQRDVEITWGDGRGQIKNNGELLTLSLDKSSGSGFQSK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
ATU276 MAITYLLPLFLSLIITSSVSANFQRDVEITWGDGRGQIKNNGELLTLSLDKSSGSGFQSK
               10        20        30        40        50        60

               70        80        90       100       110       120
MUA2.9 NEYLFGKVSMQMKLVPGNSAGTVTTLYLKSPGTTWDEIDFEFLGNSSGEPYTLHTNVYTQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
ATU276 NEYLFGKVSMQMKLVPGNSAGTVTTLYLKSPGTTWDEIDFEFLGNSSGEPYTLHTNVYTQ
               70        80        90       100       110       120

              130       140       150       160       170       180
MUA2.9 GKGDKEQQFKLWFDPTANFHTYTILWNPQRIIFTVDGTPIREFKNMESLGTLFPKNKPMR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
ATU276 GKGDKEQQFKLWFDPTANFHTYTILWNPQRIIFTVDGTPIREFKNMESLGTLFPKNKPMR
              130       140       150       160       170       180

              190       200       210       220       230       240
MUA2.9 MYSSLWNADDWATRGGLVKTDWSKAPFTASYRGFQQEACVWSNGKSSCPNASKQGTTTGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
ATU276 MYSSLWNADDWATRGGLVKTDWSKAPFTASYRGFQQEACVWSNGKSSCPNASKQGTTTGS
              190       200       210       220       230       240

              250       260       270       280       290       300
MUA2.9 WLSQELDSTAQQRMRWVQRNYMIYNYCTDAKRFPQGTFDTEFDITWGDGRGKVLNNGELL
       ::::::::::::::::::::::::::::::::::::                        
ATU276 WLSQELDSTAQQRMRWVQRNYMIYNYCTDAKRFPQGLPKECLAA                
              250       260       270       280                    

              310       320       330       340       350       360
MUA2.9 TLSLDRASGSGFQTKKEYLFGKIDMQLKLVPGNSAGTVTAYYLKSKGDTWDEIDFEFLGN

              370       380       390       400       410       420
MUA2.9 LTGDPYTMHTNVYTQGKGDREQQFHLWFDPTADFHTYSVLWNPHHIVFMVDDIPVREFKN

              430       440       450       460       470       480
MUA2.9 LQHMGIQYPKLQPMRLYSSLWNADQWATRGGLVKTDWSKAPFTASYRNFRADACVSSGGR

              490       500       510       520       530  
MUA2.9 SSCPAGSPRWFSQRLDLTAEDKMRVVQRKYMIYNYCTDTKRFPQGFPKECRH

Library scan:  0:00:00  total CPU time:  0:00:00