SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MUA2.18 (Universal genetic code) : 456 aa
 vs  library
 searching hvxylisop library

    479 residues in     1 sequences
The best scores are:                              s-w
HVXYLISOP, 479 bases, 2709 checksum.               (479)2266

>>HVXYLISOP, 479 bases, 2709 checksum.               (479 aa)
Smith-Waterman score: 2266;   75.814% identity in 430 aa overlap

                                                    10        20   
MUA2.1                                      MKKVEFFMLLLCFIAASSLVGPS
                                                                ::.
HVXYLI MKGGELLVLLLASSLCLSAAVAAQETCPADIGAKCTDAASDDWEGEFFPGIDKINYEGPT
               10        20        30        40        50        60

            30        40        50        60        70        80   
MUA2.1 SKNPLAYRWYNAEEEILGKKMKDWFRFSVAFWHTFRGTGGDPFGAATKYWPWEDGTNSVS
       ::.::.:.:::::: :::::::::::::::::::::::::::::: :: :::::::::..
HVXYLI SKKPLSYKWYNAEEVILGKKMKDWFRFSVAFWHTFRGTGGDPFGAPTKNWPWEDGTNSLA
               70        80        90       100       110       120

            90       100       110       120       130       140   
MUA2.1 MAKRRMRANFEFLKKLGVDWWCFHDRDIAPDGTTLEESNKNLDEVIELAKELQKGSKIKP
       ::::::.:.:::..::::. :::::::::::: :: :.: ::::..::::.::. ..:::
HVXYLI MAKRRMKAHFEFMEKLGVERWCFHDRDIAPDGKTLAETNANLDEIVELAKQLQSETNIKP
              130       140       150       160       170       180

           150       160       170       180       190       200   
MUA2.1 LWGTAQLFLHPRYMHGGATSSEVGVYAYAAAQVKKAMEVTHYLGGENYVFWGGREGYQTL
       ::::::::.:::::::.::: :: ::::::::::::.:::::::::::::::::::::::
HVXYLI LWGTAQLFMHPRYMHGAATSPEVKVYAYAAAQVKKALEVTHYLGGENYVFWGGREGYQTL
              190       200       210       220       230       240

           210       220       230       240       250       260   
MUA2.1 LNTDMGRELDHLARFFEAAVAYKKKIGFKGTLLIEPKPQEPTKHQYDWDAATAANFLRKY
       ::::: :::.::: :..::: .::::::.::::::::::::::::::::.::. .::.:.
HVXYLI LNTDMKRELEHLANFLQAAVNHKKKIGFNGTLLIEPKPQEPTKHQYDWDVATTFSFLQKF
              250       260       270       280       290       300

           270       280       290       300       310       320   
MUA2.1 GLIDEFKLNIECNHATLSGHTCHHELETARINGLLGNIDANTGDAQTGWDTDQFLTDVGE
       ::  :::.:.::::::::::.::::::::::: .:::::::::: :.:::::.::::..:
HVXYLI GLTGEFKINVECNHATLSGHSCHHELETARINDILGNIDANTGDPQVGWDTDEFLTDISE
              310       320       330       340       350       360

           330       340       350       360       370       380   
MUA2.1 ATMVMMSVIKNVCNIKETRYFWEFHCKFLNGGIAPGGFNFDAKLRRESTDVEDLFIAHIS
       ::..: ::.::                    :.::::::: :::::::::::::::::::
HVXYLI ATLIMSSVVKN-------------------DGLAPGGFNFYAKLRRESTDVEDLFIAHIS
              370                          380       390       400 

           390       400       410       420       430       440   
MUA2.1 GMDTMARGLRNAVKILEEGSLSELVRKRYATWDSELGKQIEEGKADFEYLEKKAKEFGEP
       :::::::: ::.::..:.:::.::::::: ..:.:.: .:: ::.::: ::::: :.:::
HVXYLI GMDTMARGRRNVVKLIEDGSLDELVRKRYQSFDTEIGAMIEAGKGDFETLEKKALEWGEP
             410       420       430       440       450       460 

           450           
MUA2.1 KVSSAKQVQVSCY     
        : :.::           
HVXYLI TVPSGKQELAEMLFQSAL
             470         

Library scan:  0:00:00  total CPU time:  0:00:01