SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MUA2.17 (Universal genetic code) : 48 aa
 vs  library
 searching s60256 library

    328 residues in     1 sequences
The best scores are:                              s-w
S60256, 328 bases, 118C checksum.                  (328) 156

>>S60256, 328 bases, 118C checksum.                  (328 aa)
Smith-Waterman score: 156;   59.524% identity in 42 aa overlap

S60256 MRPILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDV
               10        20        30        40        50        60

                                      10         20        30      
MUA2.1                        MISKLTIWFDRDWKKIEDF-VEDHLAVITTDHFMDRM
                                  .:. :.   ... :: : :.:::::::::.:: 
S60256 SRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSV-DFAVGDRLAVITTDHFVDRT
               70        80        90        100       110         

         40                                                        
MUA2.1 AAIHVEAYCGRS                                                
       :::::.:::                                                   
S60256 AAIHVKAYCEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSCGEDKVIRIWDAET
     120       130       140       150       160       170         

S60256 GKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTTVVPVNA
     180       190       200       210       220       230         

S60256 VSLSPLLNHVVLGGGEDASAVTTTDHRAGKFEAKFCDKILQEEIGGVKGHFGPINALAFN
     240       250       260       270       280       290         

S60256 PDGKSFSSGGEGGYVRLHHFDSDYFNIKI
     300       310       320        

Library scan:  0:00:00  total CPU time:  0:00:00