SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MUA2.16 (Universal genetic code) : 398 aa
 vs  library
 searching atfca126 library

    426 residues in     1 sequences
The best scores are:                              s-w
ATFCA126, 426 bases, 1BF0 checksum.                (426) 915

>>ATFCA126, 426 bases, 1BF0 checksum.                (426 aa)
Smith-Waterman score: 915;   39.225% identity in 413 aa overlap

                        10        20        30        40        50 
MUA2.1          MGLFGTKKIGKYEIGRTIGEGNFAKVKLGYDTTNGTYVAVKIIDKALVIQK
                    ::  .::::.:: .: :.::::... . ..:  ::.:::::  .:..
ATFCA1 MESPYPKSPEKITGTVLLGKYELGRRLGSGSFAKVHVARSISTGELVAIKIIDKQKTIDS
               10        20        30        40        50        60

              60         70        80        90       100          
MUA2.1 GLESQVKREIRTMKLL-NHPNIVQIHEVIGTKTKICIVMEYVSGGQLSDRLGR-QKMKES
       :.: .. :::..:. : ::::...::::..::.:: .:.::..::.:  .: :  ...::
ATFCA1 GMEPRIIREIEAMRRLHNHPNVLKIHEVMATKSKIYLVVEYAAGGELFTKLIRFGRLNES
               70        80        90       100       110       120

     110       120       130       140       150       160         
MUA2.1 DARKLFQQLIDAVDYCHNRGVYHRDLKPQNLLLDSKGNLKVSDFGLSAVPK------L--
        ::. :::: .:...::  :. :::.::::::::..::::::::::::.:.      :  
ATFCA1 AARRYFQQLASALSFCHRDGIAHRDVKPQNLLLDKQGNLKVSDFGLSALPEHRSNNGLLH
              130       140       150       160       170       180

                          170       180       190       200        
MUA2.1 -------------IMNKGYSGAAVDVWSCGVILFELLAGYPPFDDHTLPVLYKKILRADY
                    : ..::.:: .:.:::::.:: ::::: :::: .. ..:.:: . ::
ATFCA1 TACGTPAYTAPEVIAQRGYDGAKADAWSCGVFLFVLLAGYVPFDDANIVAMYRKIHKRDY
              190       200       210       220       230       240

      210       220       230                    240               
MUA2.1 TFPPGFTGEQKRLIFNILDPNP---LS-DNVA---------EINA--AT-----------
        ::  ..   . .:...:::::   .: . :          ::.   ..           
ATFCA1 RFPSWISKPARSIIYKLLDPNPETRMSIEAVMGTVWFQKSLEISEFQSSVFELDRFLEKE
              250       260       270       280       290       300

             250       260       270       280       290       300 
MUA2.1 A-SSNFINAFQIIAMSSDLDLSGLFEENDDKRYKTRIGSKNTAQETIKKIEAAATYVSLS
       : ::: :.::..:..:: ::::::::.   :: . :. .. .:.....:    .  ... 
ATFCA1 AKSSNAITAFDLISLSSGLDLSGLFERR--KRKEKRFTARVSAERVVEKAGMIGEKLGFR
              310       320         330       340       350        

             310       320        330       340       350          
MUA2.1 VERIKHFKVKIQPKEIRSRSSYDLLS-AEVIEVTPTNCVIEISKSAGELRLYM-EIYKKL
       ::. .. :: .   . :.    ...  :: . :. .. :.:  .   :.. .  :.  .:
ATFCA1 VEKKEETKV-VGLGKGRTAVVVEVVEFAEGLVVADVKVVVEGEEEEEEVESHWSELIVEL
      360        370       380       390       400       410       

     360       370       380       390        
MUA2.1 NKFYFTKIGKLIEICECPFVDVPNNILINSYMFGRKSTF
       ... ..                                 
ATFCA1 EEIVLSWHN                              
       420                                    

Library scan:  0:00:00  total CPU time:  0:00:01