SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MUA2.14 (Universal genetic code) : 333 aa
 vs  library
 searching s58293 library

    362 residues in     1 sequences
The best scores are:                              s-w
S58293, 362 bases, E5B checksum.                   (362) 707

>>S58293, 362 bases, E5B checksum.                   (362 aa)
Smith-Waterman score: 707;   40.588% identity in 340 aa overlap

               10        20        30        40          50        
MUA2.1 MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIG--LKRCGKSCRLRW
       :.:.:::.: ..:::::. ::: :: :::.:.: : :: .::.. :  :.::::::::::
S58293 MARSPCCEKNGLKKGPWTSEEDQKLVDYIQKHGYG-NWRTLPKNAGTCLQRCGKSCRLRW
               10        20        30         40        50         

       60        70        80        90       100       110        
MUA2.1 LNYLRPNIKHGGFSEEEDRIILSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLL
        :::::.::.: :: ::.. :..:.  .:..:: :::.:::::::.:::.:::...::::
S58293 TNYLRPDIKRGRFSFEEEEAIIQLHSFLGNKWSAIAARLPGRTDNEIKNFWNTHIRKKLL
      60        70        80        90       100       110         

        120         130          140       150       160       170 
MUA2.1 --GRQKQMN--RQDSITD-ST--ENNLSNNNNNKSPQNLSNSALERLQLHMQLQNLQSPF
         : .   .  : : . : :.   ..: :.....  .:.:   ..  . :.:    : :.
S58293 RMGIDPVTHSPRLD-LLDISSILASSLYNSSSHH--MNMSRLMMDTNRRHQQ----QHPL
     120       130        140       150         160           170  

              180       190       200       210             220    
MUA2.1 SSFYNNP-ILWPKLHPLLQSTTTNQNPKLASQESFHPLGVNVDH--Q----HNNTKLAQI
            :: ::  ::   . : . ::: .  .:.. . : : :::  :    :.... . .
S58293 V----NPEIL--KLATSIFSQNQNQNHN-QNQNQNQNL-V-VDHEKQTVYHHHDVNQTGV
                  180       190        200         210       220   

          230           240       250         260         270      
MUA2.1 NNGASSLYSENV---E-QSQNPAHEFQPNFG--FSQDLRLDNH-NMDFMNRG-VSKELFQ
       :.  .. : ::.   : ::. :   : :: .  :. :.  :.: :  : ... ::    .
S58293 NQYQTDQYFENAITQELQSSMPP--F-PNEAHQFN-DM--DHHFN-GFGEQNLVSTSTTS
           230       240          250          260        270      

        280         290       300        310       320       330   
MUA2.1 VGNEFELT-NG-SSWWSEEVELERKTTSSSSWGSA-SVLDQTTEGMVMLQDYAQMSYHSV
       : . .. . :  ::  :. : :.. . :..:.. : :::.                    
S58293 VQDCYNPSFNDYSS--SNFV-LDH-SYSDQSFNFANSVLNTPSSSPSPTTLNSSYINSSS
        280       290           300       310       320       330  

S58293 CSTEDEIESYCSNLMKFDIPDFLDVNGFII
            340       350       360  

Library scan:  0:00:00  total CPU time:  0:00:00