SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MUA2.11 (Universal genetic code) : 630 aa
 vs  library
 searching ntu58971 library

    551 residues in     1 sequences
The best scores are:                              s-w
NTU58971, 551 bases, 1E54 checksum.                (551)2245

>>NTU58971, 551 bases, 1E54 checksum.                (551 aa)
Smith-Waterman score: 2245;   62.657% identity in 557 aa overlap

               10        20        30        40        50        60
MUA2.1 MDSGNNNMNRAKRNLDGNDDDQPERKRPAFASVIVEALKVDSLQKLCSSLEPILRRVVSE

               70        80        90       100         110        
MUA2.1 ELERALAKLGPARLTGSSGSSPKRIEGPDGRKLQLHFKSRLS-L-PLFTGGKVEGEQGAV
                                           :.: :. : :::::.:::::.::.
NTU589                               MEETCSFSSGLGYLYPLFTGAKVEGEHGAA
                                             10        20        30

      120       130       140       150       160       170        
MUA2.1 IHVVLIDANTGRAVVYGPEASAKLHIVVLEGDFNTEDDEDWTQEEFESHVVKERSGKRPL
       ::::::::.::. :. : :.  :: .::::::::::::: ::::::.::::::: :::::
NTU589 IHVVLIDADTGHLVTTGAESCIKLDVVVLEGDFNTEDDEGWTQEEFDSHVVKEREGKRPL
               40        50        60        70        80        90

      180       190       200       210       220                  
MUA2.1 LTGEVYVTLKEGVGTLGELVFTDNSSWIRSRKFRLGLRVVSGCCDGMRI-----------
       ::::. :::: ::::::.:.::::::::::::::::..:.:: :.:.::           
NTU589 LTGELQVTLKGGVGTLGDLTFTDNSSWIRSRKFRLGMKVASGYCEGVRIREAKTEAFTVE
              100       110       120       130       140       150

            230       240       250       260       270        280 
MUA2.1 -----LYKKHYPPALNDDVWRLDKIGKDGAFHKKLTAEGINTVEDFLRVMVKDSP-KLRT
            :::::::::::::::::.::::::.:::.:.  .: :::::::..:.: : :::.
NTU589 DHRGELYKKHYPPALNDDVWRLEKIGKDGSFHKRLNKAAIFTVEDFLRLVVRD-PQKLRN
              160       170       180       190       200          

             290       300       310       320       330       340 
MUA2.1 ILGSGMSNKMWDALVEHAKTCVQSSKLYIYYAEDSRNVGVVFNNIYELSGLISGDQYFSA
       ::::::::::::::.::::::: :.:::.::..:::::::::::::::.:::.:.::.::
NTU589 ILGSGMSNKMWDALIEHAKTCVLSGKLYVYYSDDSRNVGVVFNNIYELNGLIAGEQYYSA
     210       220       230       240       250       260         

             350       360       370       380       390       400 
MUA2.1 DSLTDSQKVYVEGLVKKAYENWNLVIEYDGKSLLDLKQPQRLSITHTNLENYSTAAIDHP
       :::.:::::::..::::::.::: :.::::::.:..:: :. . .  : :   .. .:.:
NTU589 DSLSDSQKVYVDSLVKKAYDNWNQVVEYDGKSFLNIKQNQKAG-SSRN-E-LPVGPVDYP
     270       280       290       300       310          320      

              410        420            430       440       450    
MUA2.1 MQMVAG-HSSSMPPN-QSPVLS-D--FAIGG--YDQTLATRYHSHPQLLNSNPRAQFEVA
        .::    .: .: . ::   : :  . :::  :......:. .. :..::. :.::: .
NTU589 NNMVNQLPQSRLPVSVQSEQSSMDPNLLIGGSGYNDSIVARMPNQSQMMNSSSRSQFEST
        330       340       350       360       370       380      

          460       470       480       490       500       510    
MUA2.1 SCSTSQDQFMGNLHQTQSTINNQHMNGLALGPSQSSTSGYQNINPSSVHQADLNHLEDWS
         . .: : . : :: :::  .... :::::: :::.  .:... ::. :..:: .::: 
NTU589 PFAPQQ-Q-ITNTHQLQSTSYDNNV-GLALGPPQSSS--FQTMT-SSLPQTNLNPFEDWP
        390         400        410       420          430       440

          520       530       540       550       560       570    
MUA2.1 NPRERGPDDFFSEEEIRLRSHEMLESEDMQQFLRLFSMGGGGNGSATHLPEDGYTFPSFL
       . :..: :.:.::::::.::::.::..:::..::::::::: .::. .. :::: ::::.
NTU589 HNRDKGVDEFLSEEEIRMRSHEILENDDMQHLLRLFSMGGG-HGSV-NVSEDGYGFPSFM
              450       460       470       480         490        

            580       590       600       610       620       630
MUA2.1 HTPMQ--GYDEDRGRSGRAVVGWLKIKAAMRWGFFIRRKAAERRAQIVELDDDDEDGE
        .:    :::::   ::.:::::::::::::::::.:.::::::::::::::.     
NTU589 PSPSPTFGYDEDPKPSGKAVVGWLKIKAAMRWGFFVRKKAAERRAQIVELDDE     
      500       510       520       530       540       550      

Library scan:  0:00:00  total CPU time:  0:00:02