SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MUA2.10 (Universal genetic code) : 129 aa
 vs  library
 searching d30622 library

    421 residues in     1 sequences
The best scores are:                              s-w
D30622, 421 bases, 17BA checksum.                  (421) 365

>>D30622, 421 bases, 17BA checksum.                  (421 aa)
Smith-Waterman score: 365;   50.000% identity in 108 aa overlap

                                                                   
MUA2.1                                                     MSDVSLSH
                                                           :.. ....
D30622 MEKKGSVLMLRYEVGKFLGQGTFAKVYHARHLKTGDSVAIKVIDKERILKVGMTE-QIKR
               10        20        30        40        50          

       10          20        30        40        50         60     
MUA2.1 QVTVFFILSE--ILHFSQVIGTKTKICIVMEYVSGGQLSDRLGRQKMKESD-ARKLFQQL
       ..... .: .  :... .:..::.:: .:::.:.::.: ....  :..: : ::: ::::
D30622 EISAMRLLRHPNIVELHEVMATKSKIYFVMEHVKGGELFNKVSTGKLRE-DVARKYFQQL
      60        70        80        90       100        110        

          70        80        90       100       110       120     
MUA2.1 IDAVDYCHNRGVYHRDLKPQNLLLDSKGNLQVSDFGLSAVPKVTISNFLVTQSKIFGFVT
       . :::.::.::: ::::::.::::: .:::..:::::::.                    
D30622 VRAVDFCHSRGVCHRDLKPENLLLDEHGNLKISDFGLSALSDSRRQDGLLHTTCGTPTYC
      120       130       140       150       160       170        

                                                                   
MUA2.1 IKGC                                                        
                                                                   
D30622 APEVISRNGYDGFKADVWSCGVILFVLLAGYLPFRDSNLMELYKKIGKAEVKFPNWLAPG
      180       190       200       210       220       230        

D30622 AKRLLKRILDPNPNTRVSTEKIMKSSWFRKGLQEEVKESVEEETEVDAEAEGNASAEKEK
      240       250       260       270       280       290        

D30622 KRCINLNAFEIISLSTGFDLSGLFEKGEEKEEMRFTSNREASEITEKLVEIGKDLKMKVR
      300       310       320       330       340       350        

D30622 KKEHEWRVKMSAEATVVEAEVFEIAPSYHMVVLKKSGGDTAEYKRVMKESIRPALIDFVL
      360       370       380       390       400       410        

D30622 AWH
      420 

Library scan:  0:00:00  total CPU time:  0:00:00