SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MTI20.10 (Universal genetic code) : 195 aa
 vs  library
 searching ab003177 library

    209 residues in     1 sequences
The best scores are:                              s-w
AB003177, 209 bases, DF3 checksum.                 (209) 143

>>AB003177, 209 bases, DF3 checksum.                 (209 aa)
Smith-Waterman score: 143;   24.103% identity in 195 aa overlap

               10        20         30              40        50   
MTI20. MLRSQGREKLRLISVKELRIDRTWRREE-KMVGANLKA------ETMALMDKRTAMETEM
                                 :: .. :.. .:      ... :: ..  .:...
AB0031                        MSDEEARQSGGSSQAGVVTVSDVQELMRRKEEIEAQI
                                      10        20        30       

            60        70        80          90          100        
MTI20. NSIVERLCNPGGPGLSGNLIDSEGFPREDIDIPM--TSGFSVTSGPMD---V--------
       ..  . : .  : :..  :.: ::.:: :.:. .  :.  ..     :   :        
AB0031 KANYDVLESQKGIGMNEPLVDCEGYPRSDVDLYQVRTARHNIICLQNDHKAVMKQVEEAL
        40        50        60        70        80        90       

                                             110       120         
MTI20. -------------DVVTS----I-----------P---FAMVDEINESSPAAEGGLQLGD
                    :.. .    .           :   :: :. :. .:::. .:::. :
AB0031 HQLHARDKEKQARDMAEAHKEAMSRKLGQSESQGPPRAFAKVNSISPGSPASIAGLQVDD
       100       110       120       130       140       150       

     130       140       150       160       170       180         
MTI20. QVLKFGNVEGGDNLLQRLAAEAQSNQGQAVSVQVMRQGAISVWYEQQILPWIIIWGSGYG
       ....::.:.  .:. : :      : : .: ::   .::..                   
AB0031 EIVEFGSVNT-QNF-QSL-----HNIG-SV-VQ-HSEGALAPTILLSVSMNLTTPGTSSR
       160        170               180        190       200       

     190     
MTI20. ESFCES
             
AB0031 SP    
             

Library scan:  0:00:00  total CPU time:  0:00:00