SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MTG10.P1 (Universal genetic code) : 401 aa
 vs  library
 searching atu9597324 library

    531 residues in     1 sequences
The best scores are:                              s-w
ATU9597324, 531 bases, 1676 checksum.              (531)1046

>>ATU9597324, 531 bases, 1676 checksum.              (531 aa)
Smith-Waterman score: 1046;   43.510% identity in 416 aa overlap

ATU959 MFQGYDLLNQLEPFIHQILTYAQQSKEQSKIEQDRLARRIQEFRTQSELDSQQLVANAES
               10        20        30        40        50        60

ATU959 SGANGNRVGGNIPYKNTETSLTADKEGSHHHYSGSSDHNTGVFGRFRARHNRSGSLTEGS
               70        80        90       100       110       120

                                   10        20        30        40
MTG10.                     DLRFCFRIISPTKVYTLQAENAQDQMDWIEKITGVIASLL
                           :::.::::::: :.:::::::. :.:::..::: .:..::
ATU959 LGYNTIDLRTSLIKLDAEDMDLRLCFRIISPQKTYTLQAENGADRMDWVNKITKAIGTLL
              130       140       150       160       170       180

                   50           60        70         80        90  
MTG10. NPYDIEQAE----SGESTVEHP---MTGGNRSRFSGCLQQ-HDMVKTEKPIDVLTRVL-G
       : . ..:.     . ...   :   ...:.. : .   :.  : :.:     .: : : :
ATU959 NSHFLQQSPVRYLDKDNSSSAPANAVVSGDQIRHNDSRQNIGDDVST-----IL-RGLPG
              190       200       210       220             230    

             100       110       120       130       140       150 
MTG10. NERCADCGAPEPDWASLNLGVLICIECSGIHRNLGVHISKVRSLTLDVKVWEPSVLTLFQ
       :. ::.:.::::::::::::::.::.:::.::::::::::::::.::::::::..: ::.
ATU959 NNACAECNAPEPDWASLNLGVLLCIQCSGVHRNLGVHISKVRSLSLDVKVWEPTILDLFR
          240       250       260       270       280       290    

             160         170        180       190       200        
MTG10. SLGNVYVNSVWEELL--NSESRTSSA-SRSSKLLVRKPGFNDPISVKELFIHAKYSERIF
       .::::: ::.:: ::  ... . .:: :..:   : ::  .: .:::: .: .:: :. .
ATU959 NLGNVYCNSLWEGLLHLDDDCEDGSALSHAS---VSKPCPEDSFSVKEKYILGKYLEKAL
          300       310       320          330       340       350 

      210         220       230       240       250       260      
MTG10. VRKAID-SQ-HFQAVFQEIWENVRANDKKSVYRHIVCSEADVNALRGQASYTVSLPLSKM
       : :  : :. ...:. ..::: :.. . . .:: :: . .::: .  ....     .. .
ATU959 VIK--DESEANLSAA-SRIWEAVQSRNIREIYRLIVTT-GDVNII--NTKFD---DITDI
               360        370       380        390            400  

        270       280       290       300         310       320    
MTG10. MQMEETLEAKFKSIEEEFQENPAGYSNSRGDGESMVREETS--NDCSLLHLACLSADIGM
        .  . ..:  :....  ...:.    .:   ::   :  :  . :::::.::  .:  .
ATU959 -DAYHHIDAAEKAVKK--RHDPT--VCQRIK-ES--NEPRSCLQGCSLLHVACHIGDSVL
             410         420          430         440       450    

          330       340       350       360       370        380   
MTG10. VELLLQYGAKINATDSKGRTPLHHCIISRRYAIARLLLMRGGDPNAVDKDSNIPV-KYAS
       .:::::.:: .:  : .::::::::: :  . .:..:: ::. :. .. :... : . : 
ATU959 LELLLQFGADLNIRDYHGRTPLHHCISSGNHKFAKILLRRGARPS-IEDDGGLSVLERAM
          460       470       480       490        500       510   

            390       400 
MTG10. QTD-LNDSELIALLTDSKR
       .   ..: ::. ::..   
ATU959 EMGAITDEELFLLLAECA 
           520       530  

Library scan:  0:00:00  total CPU time:  0:00:00