SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MTG10.11 (Universal genetic code) : 355 aa
 vs  library
 searching atu9597314 library

    374 residues in     1 sequences
The best scores are:                              s-w
ATU9597314, 374 bases, 10C checksum.               (374) 970

>>ATU9597314, 374 bases, 10C checksum.               (374 aa)
Smith-Waterman score: 970;   45.812% identity in 382 aa overlap

               10        20        30        40        50        60
MTG10. MSRFRKTLVSAFVLCLVIFPLLVSAAEEENQCGGSKGGSAAEKASALKYKIIAFFSILIA
                           .: .:.: .  :   .  :::     ::.  ::  :::.:
ATU959              MASSTTKILCDAGESD-LC---RDDSAAF---LLKFVAIA--SILLA
                            10            20           30          

               70             80        90       100       110     
MTG10. GVFGVCLPIFG-----LKTESNFFMYVKAFAAGVILATGFVHILPDATESLTSSCLGEEP
       :. :: .:..:     :.::.:.:. .:::::::::::::::.:  .::.:.. ::   :
ATU959 GAAGVAIPLIGRNRRFLQTEGNLFVAAKAFAAGVILATGFVHMLAGGTEALSNPCL---P
       40        50        60        70        80        90        

           120       130       140           150              160  
MTG10. --PWGDFPMTGLVAMAASILTMLIESFASGYLNRS--R--LAKE---GK----TLPVSTG
         ::. ::. :. ::.:.. :.:.. ... : .:.  :   : :   :.    ..:: .:
ATU959 DFPWSKFPFPGFFAMVAALATLLVDFMGTQYYERKQERNQAATEAAAGSEEIAVVPV-VG
         100       110       120       130       140       150     

                                    170            180       190   
MTG10. ---------GEEE-----------HA----HTGS-AH-T---HASQGHSHGSLLIPQDDD
                :::.           ::    :. : .: :   :: .::::: .   .: .
ATU959 ERVTDNKVFGEEDGGGIHIVGIRAHAAHHRHSHSNSHGTCDGHA-HGHSHGHMHGNSDVE
          160       170       180       190        200       210   

           200       210       220       230       240       250   
MTG10. HIDMRKKIVTQILELGIVVHSVIIGISLGASPSVSTIKPLIAAITFHQLFEGFGLGGCIS
       .   :. .:.:::::::: ::.:::.:::.: :  ::.:::::..:::.::::.::::::
ATU959 N-GARHVVVSQILELGIVSHSIIIGLSLGVSQSPCTIRPLIAALSFHQFFEGFALGGCIS
            220       230       240       250       260       270  

           260       270       280       290       300       310   
MTG10. EAKFRVKKIWVMLMFFALTAPIGIGIGIGVAEIYNENSPMALKVSGFLNATASGILIYMA
       .:.:: :.  .:  :::::.:.::::: .::  .: .:: :: . :.:.. ..:::.:::
ATU959 QAQFRNKSATIMACFFALTTPLGIGIGTAVASSFNSHSPGALVTEGILDSLSAGILVYMA
            280       290       300       310       320       330  

           320       330       340       350     
MTG10. LVDLVAPLFMNQKTQSSMKIQVACSVSLVVGAGLMSLLAIWA
       ::::.:  :.... . ....::.  : : .:::::: :::::
ATU959 LVDLIAADFLSKRMSCNLRLQVVSYVMLFLGAGLMSALAIWA
            340       350       360       370    

Library scan:  0:00:00  total CPU time:  0:00:00