SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MTG10.10 (Universal genetic code) : 276 aa
 vs  library
 searching yct4_yeast library

    357 residues in     1 sequences
The best scores are:                              s-w
YCT4_YEAST, 357 bases, 1F0B checksum.              (357) 459

>>YCT4_YEAST, 357 bases, 1F0B checksum.              (357 aa)
Smith-Waterman score: 459;   30.565% identity in 301 aa overlap

YCT4_Y MRLAVVVTLLVHCFLVTCSPGDNLDEFIDCTYACEYNRRCPNSQINYIDPETNMFHDIEF
               10        20        30        40        50        60

                10        20             30        40        50    
MTG10.  MQEPLYLRWKQWDCQSDCQYEC--MMTR---EEERKRNGERPTKYFGKWPLKHVYGIQV
           ::: .   ::: :::.:.:  ..::   .::     :.  .. ::::. .: : : 
YCT4_Y FDTPPLYSKLLFWDCISDCDYQCQHIITRWRIDEE-----EEIYQFHGKWPFLRVLGTQE
               70        80        90            100       110     

           60        70        80         90       100       110   
MTG10. IFSLQFSLQDLAMQFQGWVSYFILVYYKLPLQ-PNRKTYYEYNGIVHIYAIIVMNSLFW-
       .::  ::. ..  ...:.:..  ..  .   .  : ..   .:   ..: . : . : : 
YCT4_Y FFSTIFSIGNFIPHYKGFVKFSRIIREEGDRRRKNSRSILIWN---YLY-VTVAGMLAWT
         120       130       140       150          160        170 

             120       130         140       150       160         
MTG10. -SSICHSRDVELTERLDYSSA--TVLAGFSLILAILRSFSIQDQSVKIMVTAPILAVVAT
        ::. : ::. .::.:::  :  :::.::  :.: . :. .  . .. . :: . :. : 
YCT4_Y ASSVFHCRDLIITEKLDYFFAGLTVLTGFHAIFARMTSMFLYPKIAQAF-TASVAAIFAL
             180       190       200       210       220        230

     170          180       190       200        210           220 
MTG10. HIL--YLNF-YNLDEGLHWKVIFGIGGIELVVWGLWAALTSHP-SKWKLRA-F---LISS
       :::  :... :. .  ......::.  .. ..  . .  . :  .: :: . :     ::
YCT4_Y HILRLYVDWSYTYN--MRFNIFFGV--LQYILLIMLSCQNYHALQKQKLMGEFKKTAYSS
              240         250         260       270       280      

                                230       240       250        260 
MTG10. ----ILTLC---------------LRMFDFPPYKGYIDAHALWRGAGI-PLSYLWWSFVC
           :. ::               :..:::  :.  :::::::.   : : :.. ..:  
YCT4_Y FKRQIFKLCVIPILLVIVTTMAMSLELFDFFSYEWQIDAHALWHLCTIWP-SWVLYDFFL
        290       300       310       320       330        340     

             270      
MTG10. DDAVFRTTVNLKKSK
       .: ..          
YCT4_Y EDYAYWGNRQLY   
         350          

Library scan:  0:00:00  total CPU time:  0:00:00