SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MTE17.P1 (Universal genetic code) : 54 aa
 vs  library
 searching mtcy1a626 library

    274 residues in     1 sequences
The best scores are:                              s-w
MTCY1A626, 274 bases, D81 checksum.                (274) 116

>>MTCY1A626, 274 bases, D81 checksum.                (274 aa)
Smith-Waterman score: 116;   33.333% identity in 54 aa overlap

                            10        20        30        40       
MTE17.              VISKNGASGDYPGCTDLAYTKAIKDGADVIDCSLQMSSDGIPFCLSS
                    :... :::.  :  :  ::  :.:.::: ..:..... ::   :. .
MTCY1A MTWADEVLAGHPFVVAHRGASAARPEHTLAAYDLALKEGADGVECDVRLTRDGHLVCVHD
               10        20        30        40        50        60

        50                                                         
MTE17. INLGEST                                                     
         : ...                                                     
MTCY1A RRLDRTSTGAGLVSTMTLAQLRELEYGAWHDSWRPDGSHGDTSLLTLDALVSLVLDWHRP
               70        80        90       100       110       120

MTCY1A VKIFVETKHPVRYGSLVENKLLALLHRFGIAAPASADRSRAVVMSFSAAAVWRIRRAAPL
              130       140       150       160       170       180

MTCY1A LPTVLLGKTPRYLTSSAATAVGATAVGPSLPALKEYPQLVDRSAAQGRAVYCWNVDEYED
              190       200       210       220       230       240

MTCY1A IDFCREVGVAWIGTHHPGRTKAWLEDGRANGTTR
              250       260       270    

Library scan:  0:00:00  total CPU time:  0:00:00