SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MTE17.14 (Universal genetic code) : 507 aa
 vs  library
 searching ataj2414 library

    452 residues in     1 sequences
The best scores are:                              s-w
ATAJ2414, 452 bases, 1ACE checksum.                (452)1728

>>ATAJ2414, 452 bases, 1ACE checksum.                (452 aa)
Smith-Waterman score: 1728;   66.256% identity in 406 aa overlap

               10        20        30        40        50        60
MTE17. MESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVS

               70        80        90       100       110       120
MTE17. ERVIMDKHIIDGRTVCDFNHFSIFQQNKQSSDLIATSSICVFESSLNLCFSKCKDQIYVL
                                                             :. ...
ATAJ24                                                      MDK-HII
                                                                   

                 130       140       150          160       170    
MTE17. Q---VEAKKAVPRDDQQVLKRHASPIHLMSPVHGG-GG--RTKKIFVGGLPSSITEEEFK
       .   :::::::::::::::::::::.::.:: ::: ::  :::::::::::::::: :::
ATAJ24 DGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPSSITEAEFK
         10        20        30        40        50        60      

          180       190       200       210       220       230    
MTE17. NYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLVEVKRAVP
       :::::::::::::::::::::::::::::::::...:: ::::::::::::.::::::::
ATAJ24 NYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKMVEVKRAVP
         70        80        90       100       110       120      

          240         250       260       270        280       290 
MTE17. KEISPVS-NIRSPLAS-GVNYGGGSNRMPANSYFNNFAPGPGFYNS-LGPVGRRFSPVIG
       ::.: .. : :::: . : :::   ::  ::::::.: : ::. :. :: .:: ::: ::
ATAJ24 KELSSTTPN-RSPLIGYGNNYGVVPNRSSANSYFNSF-P-PGYNNNNLGSAGR-FSP-IG
        130        140       150       160         170         180 

             300       310       320       330       340       350 
MTE17. SGRNAVSAFGLGLNHDLSLNLNPSCDGTSSTFGYNRIPSNPYFNGASPNRYTSPIGHNRT
       ::::: :.::::::..:  ::: . ::  .:.::.:::.: :::.::::::.::::.:: 
ATAJ24 SGRNAFSSFGLGLNQEL--NLNSNFDG--NTLGYSRIPGNQYFNSASPNRYNSPIGYNRG
             190         200         210       220       230       

             360       370       380       390       400       410 
MTE17. ESPYNSNNRDLWGNRTDTAGPGWNLNVSNGNNRGNWGLPSSSAVSNDNNGFGRNYGTSSG
       .: :: .::::::::.:..::::::.:: :::::::::  ::.:: ::::.::.::..::
ATAJ24 DSAYNPSNRDLWGNRSDSSGPGWNLGVSVGNNRGNWGL--SSVVS-DNNGYGRSYGAGSG
       240       250       260       270         280        290    

                 420       430       440        450       460      
MTE17. LSSSPF----NGFEGSIGELYRGGSVYSDSTWQQQQLPS-QSSHELDNLSRAYGYDIDNV
       ::.  :    :::.:::::::::.::::::::::. .:  :::.:::.:::.::. ::::
ATAJ24 LSGLSFAGNTNGFDGSIGELYRGSSVYSDSTWQQS-MPHHQSSNELDGLSRSYGFGIDNV
          300       310       320        330       340       350   

        470       480        490          500                      
MTE17. GSDPSANDPETYNGS-YNVGNRQTN--RGNKK-IHLNKTCNLDTF               
       :.  .    . :.:. ..  ... .  .  ::  . ...:                    
ATAJ24 GQTHQQCL-RRYSGTTMSEIDKHIEVLKHRKKSTKRSENCRSRRTAISVAEFEELLFRYQ
           360        370       380       390       400       410  

ATAJ24 VEKETNFLHHSEFLVLFFSSLASQTQKREVYFYFKNSYIR
            420       430       440       450  

Library scan:  0:00:00  total CPU time:  0:00:00