Gene organization of MTE17 (80675 bp)
Chromosome V 20-22 Mb   FTP   Reference   Kazusa Status  
Gene organization of MTE17
figure legend

potential protein genes

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MTE17.1
-
639..4844 15 1 DNA topoisomerase I (EC 5.99.1.2)
MTE17.2
-
6191..10389 15 2 DNA topoisomerase I (EC 5.99.1.2)
MTE17.3
-
31337..34749 13 0 fimbrin-like protein
MTE17.4
+
36545..36805 1 0 non-specific lipid transfer-like protein
MTE17.5
+
41517..42785 3 0 chromosome 4, ESSA I contig fragment No. 5
MTE17.6
+
43359..43670 1 0 MtN5 gene
MTE17.7
+
44497..44838 1 0 non-specific lipid transfer-like protein
MTE17.8
-
45355..45459 1 0 cold-induced mRNA product
MTE17.9
-
45727..48384 13 0 BAC TM021B04
MTE17.10
-
54624..56702 6 0 myosin-like protein mlp1
MTE17.11
-
64007..66977 7 0 chromosome 4, ESSA I contig fragment No. 0
MTE17.12
+
70136..71452 1 0 supressor protein SRP40
MTE17.13
-
73442..76342 1 0 cosmid 2i15 NPK-1 protein kinase homolog; and unknown genes
MTE17.14
-
77937..79457 1 1 Arabidosis thaliana a hnRNP-like protein


potential exons

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MTE17.P1
+
51895..52056 1 0 cosmid SCY01A6


transcribed regions

identifier direction position Definition of the most similar sequence

MTE17.T1
-
23780..24479 Lambda-PRL2 cDNA clone 36F7XP 3'
clone 126P15T7
clone 228F20T7
clone 36F7T7
MTE17.T2
+
53041..53890 clone 220M18T7
clone VBVTD05
MTE17.T3
+
59101..60392 clone 161K10T7
Lambda-PRL2 cDNA clone 161K10XP 3'
MTE17.T4
+
71994..72409 CD4-16 cDNA clone H6G6T7


potential RNA genes

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MTE17.R1
-
60569..60641 1 0 tRNA-Ala(AGC)


Reference
Structural Analysis of Arabidopsis thaliana Chromosome 5. VII. Sequence Features of the Regions of 1,013,767 bp Covered by 16 Physically assigned P1 and TAC Clones (1998) Yasukazu Nakamura, Shusei Sato, Takakazu Kaneko, Hirokazu Kotani, Erika Asamizu, Nobuyuki Miyajima, and Satoshi Tabata DNA Research, 5, 297-308
o Kazusa Status