SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MSN9.15 (Universal genetic code) : 483 aa
 vs  library
 searching atu46574 library

    404 residues in     1 sequences
The best scores are:                              s-w
ATU46574, 404 bases, 10C3 checksum.                (404)2726

>>ATU46574, 404 bases, 10C3 checksum.                (404 aa)
Smith-Waterman score: 2726;   97.304% identity in 408 aa overlap

               10        20        30        40        50        60
MSN9.1 MPVVTRLIRLKCVGLRLDRSGLNRRICHGGHGESTRRRVMEELSSLTVSQREQFLVENDV

               70        80        90       100       110       120
MSN9.1 FGIYNYFDASDVSTQKYMMEIQRDKQLDYLMKGLRQLGPQFSSLDANRPWLCYWILHSIA
                         ::::::::::::::::::::::::::::::::::::::::::
ATU465                   MEIQRDKQLDYLMKGLRQLGPQFSSLDANRPWLCYWILHSIA
                                 10        20        30        40  

              130       140       150       160       170          
MSN9.1 LLGETVDDELESNAIDFLGRCQGSEGGYGGGPGQLPHLATTYAAVNALVTLG--EYLHVT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::  . :   
ATU465 LLGETVDDELESNAIDFLGRCQGSEGGYGGGPGQLPHLATTYAAVNALVTLGGDKAL---
             50        60        70        80        90            

      180        190       200       210       220       230       
MSN9.1 HSSF-REKMSCFLRRMKDTSGGFRMHDMGEMDVRACYTAISVASILNIMDDELTQGLGDY
        ::. :::::::::::::::::::::::::.:::::::::::::::::::::::::::::
ATU465 -SSINREKMSCFLRRMKDTSGGFRMHDMGEIDVRACYTAISVASILNIMDDELTQGLGDY
      100       110       120       130       140       150        

       240       250       260       270       280       290       
MSN9.1 ILSCQTYEGGIGGEPGSEAHGGYTYCGLAAMILINEVDRLNLDSLMNWAVHRQGVEMGFQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
ATU465 ILSCQTYEGGIGGEPGSEAHGGYTYCGLAAMILINEVDRLNLDSLMNWAVHRQGVEMGFQ
      160       170       180       190       200       210        

       300       310       320       330       340       350       
MSN9.1 GRTNKLVDGCYTFWQAAPCVLLQRLYSTNDHDVHGSSHISEGTNEEHHAHDEDDLEDSDD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
ATU465 GRTNKLVDGCYTFWQAAPCVLLQRLYSTNDHDVHGSSHISEGTNEEHHAHDEDDLEDSDD
      220       230       240       250       260       270        

       360       370       380       390       400       410       
MSN9.1 DDDSDEDNDEDSVNGHRIHHTSTYINRRMQLVFDSLGLQRYVLLCSKIPDGGFRDKPRKP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
ATU465 DDDSDEDNDEDSVNGHRIHHTSTYINRRMQLVFDSLGLQRYVLLCSKIPDGGFRDKPRKP
      280       290       300       310       320       330        

       420       430       440       450       460       470       
MSN9.1 RDFYHTCYCLSGLSVAQHAWLKDEDTPPLTRDIMGGYSNLLEPVQLLHNIVMDQYNEAIE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
ATU465 RDFYHTCYCLSGLSVAQHAWLKDEDTPPLTRDIMGGYSNLLEPVQLLHNIVMDQYNEAIE
      340       350       360       370       380       390        

       480   
MSN9.1 FFFKAA
       ::::::
ATU465 FFFKAA
      400    

Library scan:  0:00:00  total CPU time:  0:00:01