Gene organization of MSH12 (79259 bp)
Chromosome V 4-6 Mb   FTP   Reference   Kazusa Status  
Gene organization of MSH12
figure legend

potential protein genes

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MSH12.1
+
14085..16265 1 0 white protein
MSH12.2
+
23638..25131 3 0 b-cell lymphoma 6 protein
MSH12.3
+
26279..28011 7 2 probable membrane protein YDL001w
MSH12.4
-
28594..29258 2 0 elongation factor ts
MSH12.5
-
30776..35288 5 9 magnesium chelatase chain
MSH12.6
+
36735..40416 6 3 hypothetical 75.4 kd protein in vps27-cse2 intergenic region
MSH12.7
+
41434..45567 13 7 Synechocystis sp. PCC6803 slr1105 (elongation factor EF-G)
MSH12.8
-
53731..58677 5 0 probable membrane protein YLR384c
MSH12.9
+
59014..63362 19 0 alpha-n-acetylglucosaminidase precursor (EC 3.2.1.50)
MSH12.10
-
67257..70072 13 0 Glycine max S-adenosyl-L-methionine:delta24-sterol-C-methyltransferase
MSH12.11
-
72341..73950 4 0 Synechococcus PCC7002 ORFA and SigA genes


potential exons

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MSH12.P1
-
133..2696 8 1 probable membrane protein YLR092w
MSH12.P2
+
10738..12433 5 1 Caenorhabditis elegans cosmid ZK287
MSH12.P3
+
46336..47174 1 0 reverse transcriptase
MSH12.P4
-
65979..66064 1 0 fms1 protein
MSH12.P5
+
76580..76744 1 0 hypothetical protein 337


transcribed regions

identifier direction position Definition of the most similar sequence

MSH12.T1
+
3750..4124 clone 120P22T7
clone 147J9T7
clone 186A14T7
clone 157G6T7
MSH12.T2
+
4270..4533 clone 117K6T7
MSH12.T3
-
4654..5174 clone 122I4T7
clone SBF11T7P
MSH12.T4
+
71151..71427 clone 130I15T7
clone 104G11T7
clone 105F11T7
MSH12.T5
+
75860..76109 clone 186J11T7


Reference
Structural Analysis of Arabidopsis thaliana Chromosome 5. II. Sequence Features of the Regions of 1,044,062 bp Covered by Thirteen Physically assigned P1 Clones. (1997) Hirokazu Kotani, Yasukazu Nakamura, Shusei Sato, Takakazu Kaneko, Erika Asamizu, Nobuyuki Miyajima, and Satoshi Tabata DNA Research, 4, 291-300
o Kazusa Status