SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MSG15.P4 (Universal genetic code) : 80 aa
 vs  library
 searching ac00034822 library

    184 residues in     1 sequences
The best scores are:                              s-w
AC00034822, 184 bases, BC checksum.                (184) 190

>>AC00034822, 184 bases, BC checksum.                (184 aa)
Smith-Waterman score: 190;   37.805% identity in 82 aa overlap

AC0003 MAGEGSKPKATVDDAYAYIRTVKSTFHNDPDKYDDFMAIMKNFKARKIDRNTCIEEVKEL
               10        20        30        40        50        60

                                                  10        20     
MSG15.                                    ALIWAIQASYGFGHKKVIFEGDNQT
                                          ::. :.: ... :..:.::::::.:
AC0003 LKGHRDLISGFNAFLPKCLEIADWYNIEVLEAELQALLMAMQHTWSKGYRKIIFEGDNRT
               70        80        90       100       110       120

          30        40        50          60        70        80   
MSG15. ITRMINTKSSNPRLQHFLDTIQSWIPSFES--IEFSFKHREQNGCADFLAKQAIKEN   
       .  ..: .. : .:....  :: :  .: .  :..::  :  :  :: :::  ...:   
AC0003 VESLLNGNTRNFELHNLIIEIQHWRKKFSNAIIKWSF--RSTNKAADRLAKGELENNVTF
              130       140       150         160       170        

AC0003 VSHSTR
      180    

Library scan:  0:00:00  total CPU time:  0:00:00