Gene organization of MSG15 (81347 bp)
Chromosome V 20-22 Mb   FTP   Reference   Kazusa Status  
Gene organization of MSG15
figure legend

potential protein genes

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MSG15.1
+
2611..5052 3 0 (r)-oxynitrilase 3
MSG15.2
-
7731..9836 3 0 (r)-oxynitrilase 1
MSG15.3
+
12204..12601 2 2 gametocyte specific antigen
MSG15.4
+
13308..14769 5 1 cosmid R04B5
MSG15.5
-
15141..17390 7 1 chromosome 4, BAC clone M7J2 (ESSAII project)
MSG15.6
-
18604..19275 1 0 chromosome 4, BAC clone M7J2 (ESSAII project)
MSG15.7
-
20515..22607 9 0 importin alpha-like protein Impa1
MSG15.8
-
25683..26378 1 0 chromosome 4, BAC clone M7J2 (ESSAII project)
MSG15.9
+
32569..34803 5 8 arginine/serine-rich splicing factor, RSp41
MSG15.10
+
40421..41935 1 0 chromosome 4, BAC clone T12H17 (ESSAII project)
MSG15.11
-
53940..55181 4 0 putative transmembrane protein G1P
MSG15.12
-
58803..60067 2 0 chromosome II BAC F19F24 genomic sequence
MSG15.13
-
68923..70950 1 0 from chromosome 19, cosmid R33485 containing pNORF1
MSG15.14
+
71691..73592 10 0 dihydrodipicolinate reductase (EC 1.3.1.26)


potential exons

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MSG15.P1
-
31..204 1 0 chromosome 4, ESSA I AP2 contig fragment No. 1
MSG15.P2
+
49742..50305 1 0 SLG-Sc and SLA-Sc genes and Melmoth retrotransposon sequence
MSG15.P3
-
64380..64513 1 0 putative DNA methyltransferase (DNMT2)
MSG15.P4
+
77037..77276 1 0 Genomic sequence for BAC T7N9


transcribed regions

identifier direction position Definition of the most similar sequence

MSG15.T1
+
31709..31954 clone RaR088; 5' end
MSG15.T2
+
68708..68845 Lambda-PRL2 cDNA clone 201G3T7


Reference
Structural Analysis of Arabidopsis thaliana Chromosome 5. VII. Sequence Features of the Regions of 1,013,767 bp Covered by 16 Physically assigned P1 and TAC Clones (1998) Yasukazu Nakamura, Shusei Sato, Takakazu Kaneko, Hirokazu Kotani, Erika Asamizu, Nobuyuki Miyajima, and Satoshi Tabata DNA Research, 5, 297-308
o Kazusa Status