SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MSF19.P1 (Universal genetic code) : 172 aa
 vs  library
 searching sp:P20431:PMA3_ARATH library

    949 residues in     1 sequences
The best scores are:                              s-w
sp|P20431|PMA3_ARATH                               (949)1123

>>sp|P20431|PMA3_ARATH                               (949 aa)
Smith-Waterman score: 1123;   100.000% identity in 172 aa overlap

               10        20        30        40        50        60
MSF19. MASGLEDIVNENVDLEKIPIEEVFQQLKCSREGLSGAEGENRLQIFGPNKLEEKKESKLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
sp|P20 MASGLEDIVNENVDLEKIPIEEVFQQLKCSREGLSGAEGENRLQIFGPNKLEEKKESKLL
               10        20        30        40        50        60

               70        80        90       100       110       120
MSF19. KFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVCLLVINSTISFVEENNAGN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
sp|P20 KFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVCLLVINSTISFVEENNAGN
               70        80        90       100       110       120

              130       140       150       160       170          
MSF19. AAAALMAGLAPKTKVLRDGKWSEQEASILVPGDIVSIKLGDIIPADARLLEG        
       ::::::::::::::::::::::::::::::::::::::::::::::::::::        
sp|P20 AAAALMAGLAPKTKVLRDGKWSEQEASILVPGDIVSIKLGDIIPADARLLEGDPLKVDQS
              130       140       150       160       170       180

sp|P20 ALTGESLPATKGPGEEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKV
              190       200       210       220       230       240

sp|P20 LTAIGNFCICSIAVGIAIEIVVMYPIQRRHYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI
              250       260       270       280       290       300

sp|P20 GSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVYCKGVEKDEVL
              310       320       330       340       350       360

sp|P20 LFAARASRVENQDAIDAAMVGMLADPKEARAGIREIHFLPFNPVDKRTALTFIDSNGNWH
              370       380       390       400       410       420

sp|P20 RVSKGAPEQILDLCNARADLRKRVHSTIDKYAERGLRSLAVSRQTVPEKTKESSGSPWEF
              430       440       450       460       470       480

sp|P20 VGVLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIAKETGRRLGMGSNMYPSSSLLG
              490       500       510       520       530       540

sp|P20 KHKDEAMAHIPVEDLIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKA
              550       560       570       580       590       600

sp|P20 DIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFG
              610       620       630       640       650       660

sp|P20 FMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGY
              670       680       690       700       710       720

sp|P20 MAIMTVVFFWAAYKTDFFPRTFHVRDLRGSEHEMMSALYLQVSIVSQALIFVTRSRSWSF
              730       740       750       760       770       780

sp|P20 TERPGYFLLIAFWVAQLIATAIAVYGNWEFARIKGIGWGWAGVIWLYSIVFYFPLDIMKF
              790       800       810       820       830       840

sp|P20 AIRYILAGTAWKNIIDNRTAFTTKQNYGIEEREAQWAHAQRTLHGLQNTETANVVPERGG
              850       860       870       880       890       900

sp|P20 YRELSEIANQAKRRAEIARLRELHTLKGHVESVVKLKGLDIETAGHYTV
              910       920       930       940         

Library scan:  0:00:00  total CPU time:  0:00:00