SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MRG7.9 (Universal genetic code) : 557 aa
 vs  library
 searching cki2_schpo library

    435 residues in     1 sequences
The best scores are:                              s-w
CKI2_SCHPO, 435 bases, 248D checksum.              (435) 506

>>CKI2_SCHPO, 435 bases, 248D checksum.              (435 aa)
Smith-Waterman score: 506;   27.968% identity in 497 aa overlap

               10        20        30        40        50        60
MRG7.9 MPELRSGARRLRQPSPQVTGQADNIELPPQPVTRRRGGGGRGRGNAKGAAPPRPAGGVGR

               70        80        90       100       110       120
MRG7.9 GRGIRLIDLEAEPCEVRPAVGEPAFNQVEAVAEKDIAMEGGSAEKVVGVEEDSSTAPVPE
                                                                   
CKI2_S                                                         MNSQ
                                                                   

               130       140       150       160             170   
MRG7.9 RVQVGNSPV-YKTERKLGKGGFGQVFVGRRVSGGSDRIGADAIEV----A--LKFEHRNS
          ::   : :.. ::.:.:.:: .: :  .   .... :  .:     :  :. :.:. 
CKI2_S TSVVG---VHYRVGRKIGEGSFGVIFDGMNLL--NNQLIAIKFEPKKSEAPQLRDEYRTY
              10        20        30          40        50         

                     180                         190       200     
MRG7.9 K---GC----N---FGP-------------P-----YEWQVYKMSPNMVACIAVESISIL
       :   :     :   ::              :     .::   ..: . ::  : . .: .
CKI2_S KLLVGNAGIPNVYYFGQEGLHNILVIDLLGPSLEDLFEWCGRRFSVKTVAMTAKQMLSRV
      60        70        80        90       100       110         

         210       220       230       240       250       260     
MRG7.9 EKLHMKGFVHGDVKPENFLLGQPGTADEKKLYLIDLGLASKWKDSHSGQHVEYDQRPDVF
       . .: :..:. :.::.:::.:.:.. . . .:..:.:.:. ..: .. :.. :..: .. 
CKI2_S QTIHEKNLVYRDIKPDNFLIGRPSSRNANMVYMVDFGMAKYYRDPKTKQYIPYSERKSL-
     120       130       140       150       160       170         

         270       280       290       300       310        320    
MRG7.9 RGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLLKGRLPWQGYQLFLEAVTN-MKFDEEP
        :: :: :...::::  :::::::::.......:.: :::::    :.:..:  :. :. 
CKI2_S SGTARYMSINTHLGREQSRRDDLESLGHVFMYFLRGSLPWQG----LKAANNKHKY-EKI
      180       190       200       210       220           230    

          330       340       350       360       370       380    
MRG7.9 NYAKLISIFDSLIEQCALSRPIKIDGALKVGQKRGRMLLNLDEDEQPKKKIRIGSPACQW
       .  :  :   :. : :: . : ...       :   .. .:. ::.:             
CKI2_S SEKKQ-S--TSISELCA-GFPNEFS-------KYMTYVRSLEFDEEPD------------
              240        250              260       270            

          390       400       410        420       430       440   
MRG7.9 ISVYNARRPMKQRYHYNVADSRLHQHVQKGN-EDGLLISCVASAANLWALIMDAGTGFTS
          : :   ... .     :. :. .   :. .::     : .    : :. : : :. :
CKI2_S ---Y-AF--LQELF-----DDVLRAN---GDTNDG-----VYD----WMLLND-GKGWES
                         280          290                300       

           450       460       470           480           490     
MRG7.9 QVYELSTVFLHKDWIMEQWEKNYYISSIAGSDNG---NS-LVV--MS-KGTSY-TQ--QS
       .  ..:.:       :.. .:::   ... .:..   :: : .  :  : .:: ..  ..
CKI2_S SSSHFSVV------AMKR-RKNYLGLNVVQNDDSRKKNSTLQTQNMRFK-SSYGVRGPRN
        310              320       330       340        350        

           500          510        520            530              
MRG7.9 YKVSDSFPFK---WINKKWKEDFH-VTSMTTAG-NR---WGVVM-SRNS-GY------SD
       :.  :..: :    . .. . . . . . .. : .:     : . : :. :       ::
CKI2_S YSSFDALPSKNAPLVRQEQSASKKTIYAHSSRGYDRVRPMYVSQPSNNAVGVNHPNDNSD
      360       370       380       390       400       410        

       540       550         
MRG7.9 QEKWAKNLYIASICFGRTVC  
       .:  ::. ..  ::  :  :  
CKI2_S SE--AKGGFFDMICC-R--CFS
      420         430        

Library scan:  0:00:00  total CPU time:  0:00:01