SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MRG7.19 (Universal genetic code) : 147 aa
 vs  library
 searching phdnanam library

    327 residues in     1 sequences
The best scores are:                              s-w
PHDNANAM, 327 bases, 225F checksum.                (327) 269

>>PHDNANAM, 327 bases, 225F checksum.                (327 aa)
Smith-Waterman score: 269;   36.913% identity in 149 aa overlap

                 10           20        30        40         50    
MRG7.1 MMPMTEEF--YD-EEEEL--GCFRFNPSEEELILDYLLPKLGFHQPN-TIYLLEDRD-NI
          : :..  .:  . .:  : :::.:..::::  ::: :. . . : :   . . : : 
PHDNAN    M-ENYQHFDCSDSNLPPG-FRFHPTDEELITYYLLKKV-L-DSNFTGRAIAEVDLN-
                   10         20        30          40        50   

             60        70                 80          90       100 
MRG7.1 YAK-EPWRLNHTENDIFEPNEWFYF-VK--------RTNRKVK-G-WKATGELKDVVSKK
         : :::.: . .  . : .::..: ..        :::: .. : :::::. ... :.:
PHDNAN --KCEPWELPE-KAKMGE-KEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSK
               60          70        80        90       100        

             110       120         130       140                   
MRG7.1 TGEVIGKKRNLRFYVEGDESK--TSGWTMREYSSIGNQNQRLCHLKGP            
       :. ..: :..: :: .:   :   :.:.:.::                            
PHDNAN TSALVGMKKTLVFY-RGRAPKGEKSNWVMHEYRLDGKFAYHYISRSSKDEWVISRVFQKS
      110       120        130       140       150       160       

PHDNAN CSTVGTTSNGGKKRLNSSFNNMYQEVSSPSSVSLPPLLESSPYNNTATSAAASKKEHVSC
       170       180       190       200       210       220       

PHDNAN FSTISTPSFDPSSVFDISSNSNTLHSLPAPSFSAILDPSSTFSRNSVFPSLRSLQENLHL
       230       240       250       260       270       280       

PHDNAN PLFSGGTSAMHGGFSSPLANWPVPETQKVDHSELDCMWSY
       290       300       310       320       

Library scan:  0:00:00  total CPU time:  0:00:00