SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MRG7.16 (Universal genetic code) : 335 aa
 vs  library
 searching ab002560 library

    375 residues in     1 sequences
The best scores are:                              s-w
AB002560, 375 bases, 29E checksum.                 (375) 905

>>AB002560, 375 bases, 29E checksum.                 (375 aa)
Smith-Waterman score: 905;   42.744% identity in 379 aa overlap

               10        20        30        40        50        60
MRG7.1 MAVVVEEGVVLNHGGEELVDLPPGFRFHPTDEEIITCYLKEKVLNSRFTAVAMGEADLNK
                  .:::.    :::::::::::::.:: :: .:::.. :.. :..:.::::
AB0025    MDIPYYHYDHGGDSQY-LPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNK
                  10         20        30        40        50      

               70        80        90       100       110          
MRG7.1 CEPWDLPKRAKMGEKEFYFFCQRDRKYPTGMRTNRATESGYWKATGKDKEIFKGKGC-LV
       ::::.:: ::::::::.:::  ::::::::.:::::::.:::::::::.:::..: : ::
AB0025 CEPWQLPGRAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALV
         60        70        80        90       100       110      

     120       130       140       150       160       170         
MRG7.1 GMKKTLVFYRGRAPKGEKTNWVMHEYRLEGKYSYYNLPKSARDEWVVCRVFHKNN-PST-
       :::::::::.::::::::.::::::::::::.::. . .:..::::. :::.:..  :: 
AB0025 GMKKTLVFYKGRAPKGEKSNWVMHEYRLEGKFSYHFISRSSKDEWVISRVFQKTTLASTG
        120       130       140       150       160       170      

                        180         190       200        210       
MRG7.1 -----------T------TQPM--TRIPVEDFTRMDSLENIDHLLDFS-SLPPLIDPSF-
                  :      : :   :..:   ..: .  :. .     : :::::.::.  
AB0025 AVSEGGGGGGATVSVSSGTGPSKKTKVP-STISR-NYQEQPSS--PSSVSLPPLLDPTTT
        180       190       200         210         220       230  

        220          230       240       250       260       270   
MRG7.1 MSQTEQP-NF--KPINPPTYDISSPIQPHHFNSYQSIFNHQVFGSASGSTYNNNNEM---
       .. :..  ..  .  :  :   .: :  .: . ....    .  .: :   :. ...   
AB0025 LGYTDSSCSYDSRSTNT-TVT-ASAIT-EHVSCFSTV---PTTTTALGLDVNSFSRLPPP
            240        250         260          270       280      

                    280        290             300          310    
MRG7.1 IKME----QSLVS--VSQETCLSS-DVNANM------TTTTEVSSG---PVMKQEMGMMG
       . ..      .::  :: .. . : . : :.      .... ..:.   : ..   :. :
AB0025 LGFDFDPFPRFVSRNVSTQSNFRSFQENFNQFPYFGSSSASTMTSAVNLPSFQGGGGVSG
        290       300       310       320       330       340      

             320           330       
MRG7.1 MVN---GSKSYEDLCD---LR-G-D-LWDF
       : :    . . :.      :. : : .:..
AB0025 M-NYWLPATAEENESKVGVLHAGLDCIWNY
         350       360       370     

Library scan:  0:00:00  total CPU time:  0:00:00