SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MRG7.12 (Universal genetic code) : 261 aa
 vs  library
 searching sdr1_picab library

    271 residues in     1 sequences
The best scores are:                              s-w
SDR1_PICAB, 271 bases, 96 checksum.                (271) 961

>>SDR1_PICAB, 271 bases, 96 checksum.                (271 aa)
Smith-Waterman score: 961;   58.333% identity in 252 aa overlap

                          10        20        30        40         
MRG7.1            MASSVSSLAGRVAIVTGSSRGIGRAIAIHLAELGAKIVINYTTRSTEAD
                         :.::::::::.:::::: ::...:: :::.::.:.. .  :.
SDR1_P MATADEQEEEMRMRLPLPLGGRVAIVTGASRGIGREIALNMAEKGAKVVIHYSSNQHAAE
               10        20        30        40        50        60

      50        60         70        80        90       100        
MRG7.1 QVAAEINSSAGTVPQPI-AVVFLADISEPSQIKSLFDAAEKAFNSPVHILVNSAGILNPN
       .::. ::... .  . . :.:  ::..::::. .:::.::.::. :.::.::.::. . .
SDR1_P EVASIINNKSPSSGDGVRAIVCKADVAEPSQVAQLFDTAEHAFG-PLHIVVNNAGVTDSK
               70        80        90       100        110         

      110       120       130       140       150       160        
MRG7.1 YPTIANTPIEEFDRIFKVNTRGSFLCCKEAAKRLKRGGGGRIILLTSSLTEAL-IPGQGA
       :::.:.:  ::.::::.:: .:.::: .:::::. :::::::: ..:::. :. ::  ::
SDR1_P YPTLAQTSDEEWDRIFQVNCKGAFLCSREAAKRVVRGGGGRIINISSSLV-AMPIPRYGA
     120       130       140       150       160        170        

       170       180       190       200       210       220       
MRG7.1 YTASKAAVEAMVKILAKELKGLGITANCVSPGPVATEMFFDGKSEETVMNIIERSPFGRL
       ::::::::: :..:::.::.:  ::::::.::::::.::: :::: .:   .. .:: ::
SDR1_P YTASKAAVEMMTRILAQELRGTQITANCVAPGPVATDMFFAGKSEAAVEAGVKSNPFERL
      180       190       200       210       220       230        

       230       240       250       260 
MRG7.1 GETKDIASVVGFLASDGGEWINGQVIVANGAFLK
       :...:.: .:.::::: :::.:.::. .::.   
SDR1_P GKVEDVAPLVAFLASDEGEWVNAQVVRVNGGQV 
      240       250       260       270  

Library scan:  0:00:00  total CPU time:  0:00:00