SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MRG7.10 (Universal genetic code) : 410 aa
 vs  library
 searching higaltkmr1 library

    349 residues in     1 sequences
The best scores are:                              s-w
HIGALTKMR1, 349 bases, 872 checksum.               (349) 493

>>HIGALTKMR1, 349 bases, 872 checksum.               (349 aa)
Smith-Waterman score: 493;   26.479% identity in 355 aa overlap

               10        20        30        40        50          
MRG7.1 MTSPSHASDRGGGDGDSVENQSPELRKDPVTNRWVIFSPARAKRPTDFKSKSPQ-NPNPK
                           . :. : .:. ..::. :: :::::  ..... . : . :
HIGALT             MTALFEPTEHPHRRYNPLIDQWVLVSPHRAKRP--WQGQQEKVNEEQK
                           10        20        30          40      

      60        70        80          90       100         110     
MRG7.1 PSSCPFCIGREQECAPELFRVPDH-DPNW-KLRVIENLYPALSRNLET--QSTQP--ETG
       ::  : :      : :   :.  . .:.. :  :..: . :: ..  .  .:..:  ...
HIGALT PSYDPTCY----LC-PSNKRITGELNPDYRKPYVFKNDFSALLEDTPAPEKSSDPLFQSS
         50             60        70        80        90       100 

           120       130       140       150        160       170  
MRG7.1 TSRTIVGFGFHDVVIESPVHSIQLSDIDPVGIGDILIAYKKRINQI-AQHDSINYIQVFK
        .:     :   :.  :: ::  :  .  . : ... ...... .. :...   ..:.:.
HIGALT QAR-----GESRVICFSPDHSKTLPLLTALEIEEVIKVWQEQLRELGAKYQ---WVQIFE
                  110       120       130       140          150   

            180       190       200        210       220           
MRG7.1 NQGASAGASMSHSHSQMMALPVVPPTVSSRLDGT-KDYFEETGKCCLCE-AKS----KHF
       :.::. : :  : :.:. :   .:  :. : : : .::. . :.  : . .:     :. 
HIGALT NKGAAMGCSNPHPHGQIWANSFLPNEVA-REDRTQRDYLLKHGSVMLVDYVKRELALKER
           160       170       180        190       200       210  

        230       240       250       260       270       280      
MRG7.1 VIDESSHFVSVAPFAATYPFEIWIIPKDHSSHFHHLDDVKAVDLGGLLKLMLQKIAKQLN
       .. :. :.:...:. :..:::  ..:: : ... .:.: .. ::. .:: .  :  . ..
HIGALT IVVETEHWVALVPYWAVWPFETLLLPKTHVKRLTELSDEQSKDLAVILKKLTTKYDNLFE
            220       230       240       250       260       270  

         290       300       310           320             330     
MRG7.1 DP-PYNYMIHTSPLKVTESQLPYTHWFLQ--IVPQL--SG------VGVDLRRKQWESLR
          ::.. .:..:..  ...    :: :.  . : :  :.      :: ..  .. ..: 
HIGALT TSFPYSMGFHAAPFNGEDNE----HWQLHAHFYPPLLRSATVRKFMVGYEMLGENQRDLT
            280       290           300       310       320        

         340       350       360       370       380       390     
MRG7.1 SLMEFNRCLKKVTDISLVLMRPSSKTLKLARSFPPLPALLLAPMVCLSSSDSKSIVSVML
       . .  .: :. ....                                             
HIGALT AEQAADR-LRALSEVHYKERTK                                      
      330        340                                               

         400       410
MRG7.1 ESVYDYCSDLGMNKD

Library scan:  0:00:00  total CPU time:  0:00:00