SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MRA19.P2 (Universal genetic code) : 51 aa
 vs  library
 searching atfca636 library

    600 residues in     1 sequences
The best scores are:                              s-w
ATFCA636, 600 bases, 14DF checksum.                (600) 182

>>ATFCA636, 600 bases, 14DF checksum.                (600 aa)
Smith-Waterman score: 182;   53.846% identity in 52 aa overlap

                                                         10        
MRA19.                                           KIHSIWGERNARRHGEQP
                                                 : :   .::: :::::.:
ATFCA6 MYLIEPVRVDNSETTQFPASTLLSNRTLATLELELCHSLSDAKNHCQRNERNQRRHGESP
               10        20        30        40        50        60

       20        30         40        50                           
MRA19. SPPEKLVKMIDKNV-NRLNTIRSGGTNKLVGGIQ                          
       : ::.:...::::: :::.:. .::. :   :..                          
ATFCA6 SQPERLISLIDKNVRNRLTTMSGGGVLKYKDGMRKEVETAEKAILFKEELEMIDSLQRLG
               70        80        90       100       110       120

ATFCA6 ISYHYKHEIHDILRKIHDQHGEIERETQDLHATSLEFILLRQHGFDVSQDAFDVFISETG
              130       140       150       160       170       180

ATFCA6 EFRKTLHSDIKGLLSLYEASYFSMDSEFKLKETRIYANKRLSEFVAESSKTICREDETYI
              190       200       210       220       230       240

ATFCA6 LEMVKRALETPYHWSIRRLEARWYINVYEKKHEMNPLLLEFAAIDFNMLQANHQEELKLI
              250       260       270       280       290       300

ATFCA6 SSTGLMKQLDFVRDRITESYFWTIGIFYEPEFKYCRKILTKIFMLIVIMDDIYDIYGTLE
              310       320       330       340       350       360

ATFCA6 ELELFTNVVEKWDVNHVERLPNYMRMCFLFLYNEINQIGYDVLRDKGLNVIPYLKQVWTD
              370       380       390       400       410       420

ATFCA6 LFKTFLTESKWYKTGHKPSFEEYMQNGVISSSVPTILLHLFSVLSDHISDQTLTDDSKNH
              430       440       450       460       470       480

ATFCA6 SVVRSCATILRLANDLATSTEEMARGDSPKSVQCYMYETRASEEEARRHMQSMISDSWDI
              490       500       510       520       530       540

ATFCA6 INSDLKTAHTSSLPRGFLAAAANLNRVVQCIYRHGDGHGSPEKTKTVDYIQSVLFNPVPL
              550       560       570       580       590       600

Library scan:  0:00:00  total CPU time:  0:00:00