SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MRA19.12 (Universal genetic code) : 182 aa
 vs  library
 searching rl11_arath library

    182 residues in     1 sequences
The best scores are:                              s-w
RL11_ARATH, 182 bases, 1A95 checksum.              (182)1186

>>RL11_ARATH, 182 bases, 1A95 checksum.              (182 aa)
Smith-Waterman score: 1186;   99.451% identity in 182 aa overlap

               10        20        30        40        50        60
MRA19. MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RL11_A MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG
               10        20        30        40        50        60

               70        80        90       100       110       120
MRA19. IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RL11_A IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
               70        80        90       100       110       120

              130       140       150       160       170       180
MRA19. STGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI
       :::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::
RL11_A STGIYGMEFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI
              130       140       150       160       170       180

         
MRA19. TG
       ::
RL11_A TG
         

Library scan:  0:00:00  total CPU time:  0:00:00