SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MRA19.10 (Universal genetic code) : 216 aa
 vs  library
 searching s41431 library

    217 residues in     1 sequences
The best scores are:                              s-w
S41431, 217 bases, 1F3 checksum.                   (217)1200

>>S41431, 217 bases, 1F3 checksum.                   (217 aa)
Smith-Waterman score: 1200;   86.239% identity in 218 aa overlap

               10        20        30        40        50        60
MRA19. MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK
       ::::::::.:::::::::::::::::::::::::::::.::::::::::::::.::::.:
S41431 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK
               10        20        30        40        50        60

               70        80        90       100       110       120
MRA19. VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV
       ::::::::::::::::::::::::::::::::::::::.:::::. :::::::::: :::
S41431 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIV
               70        80        90       100       110       120

              130       140       150       160       170       180
MRA19. VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSK
       :::::::.::::::::.:::.::.::::::::::::::::::::::::::::::.:::::
S41431 VMLVGNKADLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSK
              130       140       150       160       170       180

              190         200       210      
MRA19. KAMEAASESAN--VPSKGDKIDIGKDVSAVKKGGCCSN
       :..:.: :..:  ::.::.:::. .::::.:. ::::.
S41431 KTVEGA-ENGNASVPAKGEKIDLKNDVSALKRVGCCSS
               190       200       210       

Library scan:  0:00:00  total CPU time:  0:00:00