SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MQN23.9 (Universal genetic code) : 341 aa
 vs  library
 searching yaeb_schpo library

    313 residues in     1 sequences
The best scores are:                              s-w
YAEB_SCHPO, 313 bases, 796 checksum.               (313) 552

>>YAEB_SCHPO, 313 bases, 796 checksum.               (313 aa)
Smith-Waterman score: 552;   35.077% identity in 325 aa overlap

               10        20        30        40        50          
MQN23. MGSSSDETPVVLITGCSQGGIGHALAREFSANGCRVVATSRSQKTMTELEKDSKFFVQ--
                 :::::::.::::.::: .:  .: .:.::.:. . : .: : .   .:  
YAEB_S     MEAEKFVLITGCSEGGIGNALALKFHQEGFQVLATARQVERMDNLTKAG---LQTL
                   10        20        30        40           50   

       60        70          80        90       100       110      
MQN23. ELDVQSEQSVSKVVSKVIDKF--GQIDVLVNNAGVQCIGPLAEIPISAMDYTFNTNVLGS
       .::: .:.:: .: ..:  ::  :..  :.::::. : .:  .. :  .. ....:  : 
YAEB_S KLDVTDEDSVREVEQEV-RKFTNGSLHYLINNAGAPCSAPAIDLDIEDVSKVMDVNFYGV
            60        70         80        90       100       110  

        120       130       140       150       160       170      
MQN23. MRMTQAVVPHMASKKKGKIVNIGSISIMAPGPWAGVYTASKAALHALTDTLRLELKPFGI
       .::..:   :.  . :: :::..:.  ..:  . ..:.:::::: : ..:::.:: :::.
YAEB_S IRMNKAF-QHQLIRAKGTIVNVNSLVSYVPFAFNAAYNASKAALLAYSNTLRIELAPFGV
             120       130       140       150       160       170 

        180       190       200         210       220         230  
MQN23. DVINIVPGGIQSNIANSGISSFNN--LPELKLYKPFEDAIRERAFLSQN-I-KPIPTETF
       .: .:. ::.:..: .. ......  .:: ..: :..  : :    ..: . : .  : :
YAEB_S QVTSIMTGGVQTKIQSKPLGTMTEAAIPENSIYYPYRKLILE----NRNPVEKFVTIEEF
             180       190       200       210           220       

             240                   250       260        270        
MQN23. AKETV-SVV-------LKKNP---PA--WYSTETVLNVSNKV-NVLPNHVTSL-VKGLIK
       :  .  ..:       : : :   ::  : .    .. ...: ..:: .: :. :. :: 
YAEB_S ADAAYPQLVGRGRWYQLFK-PGVRPAQIWAG---YMSSAGRVGSMLPVEVFSMSVR-LI-
       230       240        250          260       270        280  

       280       290        300           310       320       330  
MQN23. VKLNSKQDKTVKPD-CLLDYPYTLVFGT--KI--CRGNVISSVMQLATQQCIIRGQDKKW
       ::: :    :.. : :. .. ... .:   .:  :                         
YAEB_S VKLPS----TAQSDMCF-SF-WNIGIGINFEIVACIFL                      
                 290         300       310                         

            340 
MQN23. SEVQCKAYS

Library scan:  0:00:00  total CPU time:  0:00:00