SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MQN23.11 (Universal genetic code) : 310 aa
 vs  library
 searching s26605 library

    421 residues in     1 sequences
The best scores are:                              s-w
S26605, 421 bases, 16A0 checksum.                  (421) 832

>>S26605, 421 bases, 16A0 checksum.                  (421 aa)
Smith-Waterman score: 832;   40.997% identity in 361 aa overlap

               10        20        30        40        50        60
MQN23. MGRSPSSDETGLKKGPWLPEEDDKLINYIHKHGHSSWSALPKLAGLNRCGKSCRLRWTNY
       :::::  :..::::::: ::::.::. ::..:::.:: :::  :::.:::::::::::::
S26605 MGRSPCCDKVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNY
               10        20        30        40        50        60

               70        80        90       100       110       120
MQN23. LRPDIKRGKFSAEEEETILNLHAVLGNKWSMIASHLPGRTDNEIKNFWNTHLKKKLIQMG
       ::::::::::. .::.::..:::.:::.:: ::.::: ::::::::.:::::::.:..::
S26605 LRPDIKRGKFTLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLVKMG
               70        80        90       100       110       120

              130       140       150        160              170  
MQN23. FDPMTHQPRTDDIFSSLSQLMSLSNLRGLVDLQQ-QFPMED----QALL--N-LQTEMAK
       .::.::.:..: ..:  .:  . .::  ... .. ..  :     :. :  : .:. .:.
S26605 IDPVTHKPKNDALLSHDGQSKNAANLSHMAQWESARLEAEARLVRQSKLRSNSFQNPLAS
              130       140       150       160       170       180

                  180                    190           200         
MQN23. LQLFQY------LLQP--SP--AP-----MSI----NNI--NP-N-ILNLLIKEN-SVTS
        .::        : .:  .:  ::     ...    :..  .: : .:.   . . :.: 
S26605 HELFTSPTPSSPLHKPIVTPTKAPGSPRCLDVLKAWNGVWTKPMNDVLHADGSTSASATV
              190       200       210       220       230       240

      210            220       230            240            250   
MQN23. NID-LGF-L---SSHLQDFNNNNLPSLKTLDDN-----HFSQNTSP-----IWLHEPPSL
       ... ::. :   .: :. :.: .  :   ...:     .:  :.:      : ..:    
S26605 SVNALGLDLESPTSTLSYFENAQHISTGMIQENSTSLFEFVGNSSGSSEGGI-MNEESEE
              250       260       270       280       290          

              260        270        280        290       300       
MQN23. NQTML---PT-HDPCAQSVDGFGSNQAS-SSHDQEVAVT-DSVDWPDHHLFDDSMFPDIS
       .   .    : : :  .  ::.. :. : .:  :....  :.. :  . : ...   :::
S26605 DWKGFGNSSTGHLPEYK--DGINENSMSLTSTLQDLTMPMDTT-WTAESLRSNA--EDIS
     300       310         320       330       340        350      

       310                                                         
MQN23. YQS                                                         
       .                                                           
S26605 HGNNFVETFTDLLLSTSGDGGLSGNGTDSDNGGGSGNDPSETCGDNKNYWNSIFNLVNSS
          360       370       380       390       400       410    

S26605 PSDSAMF
          420 

Library scan:  0:00:00  total CPU time:  0:00:00