Gene organization of MQN23 (86064 bp)
Chromosome V 24-26 Mb   FTP   Reference   Kazusa Status  
Gene organization of MQN23
figure legend

potential protein genes

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MQN23.1
-
4801..6471 1 0 ethylene-insensitive 3 (EIN3)
MQN23.2
-
7787..10445 7 8 acyl-CoA oxidase homolog
MQN23.3
+
15366..16196 1 0 AP2 domain containing protein RAP2.4
MQN23.4
-
18213..20040 8 1 Mycobacterium tuberculosis sequence v004 product
MQN23.5
-
29423..30932 4 0 Human tetratricopeptide repeat protein
MQN23.6
-
32481..33885 5 0 succinate dehydrogenase iron-sulphur subunit
MQN23.7
+
43588..45766 7 1 hypothetical 30.2 kD protein c02f5.4 in chromosome III
MQN23.8
-
46139..47806 1 0 chromosome II BAC T20D16 genomic sequence
MQN23.9
-
48422..49980 5 0 hypothetical oxidoreductase c23d3.11 in chromosome I (EC 1.-.-.-)
MQN23.10
+
56994..58709 8 12 transcription factor tga1
MQN23.11
+
66253..67368 3 0 myb-related protein 1
MQN23.12
-
72946..75613 9 0 somatic embryogenesis receptor-like kinase
MQN23.13
+
81400..82510 2 2 SR1 Nt-rab11d mRNA product


potential exons

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MQN23.P1
+
144..4294 8 0 synaptojanin 2
MQN23.P2
-
71698..71805 1 0 alternative oxidase
MQN23.P3
-
78829..79020 1 2 chromosome II cosmid c16E9


transcribed regions

identifier direction position Definition of the most similar sequence

MQN23.T1
+
28315..28590 clone YAP058T7
MQN23.T2
+
39327..39576 Lambda-PRL2 cDNA clone 240P2T7
MQN23.T3
+
55788..56018 Lambda-PRL2 cDNA clone 97G24T7
MQN23.T4
+
59206..59609 Lambda-PRL2 cDNA clone 92N12T7
Lambda-PRL2 cDNA clone 76D11T7
Lambda-PRL2 cDNA clone 241I8T7
Lambda-PRL2 cDNA clone 317G11T7
Lambda-PRL2 cDNA clone 123L9T7
Lambda-PRL2 cDNA clone 189O18T7
CD4-13 cDNA clone E8B3T7
Lambda-PRL2 cDNA clone 251H17T7
CD4-13 cDNA clone E10F3T7
MQN23.T5
-
60265..60615 CD4-13 cDNA clone E8A1T7
CD4-13 cDNA clone E10F2T7
MQN23.T6
-
78194..78739 clone YAP043T, 3' end
MQN23.T7
-
80824..81000 Lambda-PRL2 cDNA clone 245M8T7
MQN23.T8
-
83984..84475 Lambda-PRL2 cDNA clone 37D6XP 3'
MQN23.T9
-
85608..86064 Lambda-PRL2 cDNA clone 37D6T7


Reference
Structural Analysis of Arabidopsis thaliana Chromosome 5. VI. Sequence Features of the Regions of 1,367,185 bp Covered by 19 Physically assigned P1 and TAC Clones (1998) Hirokazu Kotani, Yasukazu Nakamura, Shusei Sato, Erika Asamizu, Takakazu Kaneko, Nobuyuki Miyajima, and Satoshi Tabata DNA Research, 5, 213-216
o Kazusa Status