SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MQD22.9 (Universal genetic code) : 164 aa
 vs  library
 searching ststs15 library

    183 residues in     1 sequences
The best scores are:                              s-w
STSTS15, 183 bases, 1120 checksum.                 (183) 339

>>STSTS15, 183 bases, 1120 checksum.                 (183 aa)
Smith-Waterman score: 339;   37.870% identity in 169 aa overlap

               10           20        30         40        50      
MQD22. MTFLFYFAMFFLLLN-AF--TIAQSLIQDFCKKAADKNPK-IHYNFCVKSLEENPQSKTA
       :  :  : .:. :.: .:  . ::.:::  :: . .:: . : :.::..::.  : :. :
STSTS1 MKHLSSFFLFLSLFNLTFYGSTAQNLIQTTCK-SCSKNESSITYGFCTSSLQAAPASQCA
               10        20        30         40        50         

         60         70        80        90       100       110     
MQD22. RSLDR-LVMLSTKNAVSKTTSMKGIVDKILKENRFEMYSEKPLRDCLELYSDATNSLKEA
        .: : : :.: .    ..:. .  :  .::.. ...:... :. ::.:::::  ..: :
STSTS1 -TL-RGLGMISIRLIRYNVTDTRCHVKMLLKDKNLDLYNRSRLKVCLDLYSDAIPTIKLA
       60         70        80        90       100       110       

         120       130       140       150       160               
MQD22. LTIIKSRDYKTANVVISAAMGAPPSCEIGFKEGKKPLKSPFTKDNDVLF           
       .   ... :  ::. ::: ...  .:: :::: :.   ::.:  ::  :           
STSTS1 MKSYNTKKYYDANIQISAIIATATTCEDGFKE-KEGAVSPLTMRNDNTFQLSAIALSVMN
       120       130       140        150       160       170      

STSTS1 LVMNNNG
        180   

Library scan:  0:00:00  total CPU time:  0:00:00