SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MQD22.10 (Universal genetic code) : 184 aa
 vs  library
 searching ststs15 library

    183 residues in     1 sequences
The best scores are:                              s-w
STSTS15, 183 bases, 1120 checksum.                 (183) 241

>>STSTS15, 183 bases, 1120 checksum.                 (183 aa)
Smith-Waterman score: 241;   29.146% identity in 199 aa overlap

                 10          20        30        40         50     
MQD22. MKFLIHL--VVLFLHL-N-GFMANRVADSLIQKSCKENTRYAEPYI-YKFCITSIKENPE
       ::   ::    ::: : :  :... .:..::: .::  ..  :  : : :: .:..  : 
STSTS1 MK---HLSSFFLFLSLFNLTFYGS-TAQNLIQTTCKSCSK-NESSITYGFCTSSLQAAPA
                  10        20         30         40        50     

            60        70         80        90         100       110
MQD22. SQ--KVRNIDELTVVCTNSAIS-NLTKVKGTVENILNERKYKN-KL-SHTFLRECLKLYS
       ::   .:..  ...      :  :.: ..  :. .:   : ::  : ... :. :: :::
STSTS1 SQCATLRGLGMISI----RLIRYNVTDTRCHVKMLL---KDKNLDLYNRSRLKVCLDLYS
          60            70        80           90       100        

              120       130         140       150       160        
MQD22. EGYELLNSALKYLKTLDYEKFIGNMDMAK--GKPRACEMKFNDDNHQISPVKKENDVLFD
       ..   .. :.:  .:  :  . .:....   .   .::  :.. .  .::.  .::  :.
STSTS1 DAIPTIKLAMKSYNTKKY--YDANIQISAIIATATTCEDGFKEKEGAVSPLTMRNDNTFQ
      110       120         130       140       150       160      

        170        180    
MQD22. M--INIPYY-FCFNAHING
       .  : .  . . .:   ::
STSTS1 LSAIALSVMNLVMNN--NG
        170       180     

Library scan:  0:00:00  total CPU time:  0:00:00