SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MPL12.9 (Universal genetic code) : 326 aa
 vs  library
 searching atac0023379 library

    337 residues in     1 sequences
The best scores are:                              s-w
ATAC0023379, 337 bases, E1B checksum.              (337) 639

>>ATAC0023379, 337 bases, E1B checksum.              (337 aa)
Smith-Waterman score: 639;   37.260% identity in 365 aa overlap

                 10        20        30         40        50       
MPL12. MSHEIKDLN--NYHYTSSYNHYNINNQNMINLPYVS-GPSAYNANMISSSQVGFDLPSKN
          :. :..  ...: :: . ....  ..      : :   .  ...::.:   :. .  
ATAC00   MEFTDFSKTSFYYPSSQSVWDFG--DLAAAERHSLG---F-MELLSSQQHQ-DFAT--
                 10        20          30            40            

        60             70             80        90       100       
MPL12. LSPQGAFELGF-----ELSPS---SSDFFN--PSLDQENGLYNAYNYNSSQKSHEVVGDG
       .::. .: :       . .::   ::....  :: .:   : .. . .:  ..: ...  
ATAC00 VSPH-SFLLQTSQPQTQTQPSAKLSSSIIQAPPS-EQ---LVTS-KVESLCSDHLLINPP
      50         60        70        80             90       100   

       110       120       130       140       150          160    
MPL12. CATIKSEVRVSASPSSSEADHHPGEDSGKIRKKREVRDGGEDDQ-RS--QKVVKTKKKEE
        :: .:    : : .:::: .   :.. : . ..:  .::::.: .:  .: .:.::...
ATAC00 -ATPNSS---SISSASSEALN---EEKPKTEDNEE--EGGEDQQEKSHTKKQLKAKKNNQ
               110       120          130         140       150    

           170       180       190       200       210       220   
MPL12. KK-KEPRVSFMTKTEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKRVERSY
       :. .: ::.::::.:::::::::::::::::::::::.::::::::: .::::::::::.
ATAC00 KRQREARVAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTTASCNVKKRVERSF
          160       170       180       190       200       210    

           230         240         250               260           
MPL12. QDPTVVITTYESQHNH--PIPTNR--RTAMFSGTT--ASDY-N-----P---SS--SPIF
       .::..:.::::.::.:  :. :.:   :. : :..  ::.  :     :   :.  :: :
ATAC00 RDPSTVVTTYEGQHTHISPL-TSRPISTGGFFGSSGAASSLGNGCFGFPIDGSTLISPQF
          220       230        240       250       260       270   

        270       280       290         300         310            
MPL12. SDLIINTPRSFSNDDLFRVPYASVN--VNPSYHQQQHGFHQ--QESEF---E--LLKEMF
       ..:. .  .. ....:.   ...::  .: : : ...:  .  ..:.    .  ::... 
ATAC00 QQLV-QYHHQQQQQELMSC-FGGVNEYLN-S-HANEYGDDNRVKKSRVLVKDNGLLQDVV
            280       290        300         310       320         

       320      
MPL12. PSVFFKQEP
       :: ..:.: 
ATAC00 PSHMLKEE 
     330        

Library scan:  0:00:00  total CPU time:  0:00:00