SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MPL12.14 (Universal genetic code) : 383 aa
 vs  library
 searching celf45e124 library

    246 residues in     1 sequences
The best scores are:                              s-w
CELF45E124, 246 bases, 165E checksum.              (246) 334

>>CELF45E124, 246 bases, 165E checksum.              (246 aa)
Smith-Waterman score: 334;   28.689% identity in 244 aa overlap

               10        20        30        40        50        60
MPL12. MKSKISKVLGVCKKHKASTRNSCSLSKISGDLESITAAITTCHDDEKQHPGLDTFSRESE

               70        80        90       100       110       120
MPL12. TNEPAEMLVEDTSQSQGFAPWVDGSQSVENMENACNHMSNSDTIFSPVLNDELDGTGRVF

              130       140         150       160       170        
MPL12. TAGNSVIWETPRWGADESSNKICFDNQT--CNVSDFYISDVLIASLPFDESGNNDAFTEI
                                 :.  : .. :.  . ..  : : ...   :. . 
CELF45                      MTTIAQSVFCFLAGFF--NFFL--LYFRKTSR--AYCKY
                                    10          20            30   

      180        190       200       210         220       230     
MPL12. SPLP-HYIFPEQYMVLPYLEDGSANKDDIKSDTDK--INLDNHDLFLAFNRTRSYNVEPD
       . .  :  .: . ..   :   ....  .  : :.  :. ..::  :   .: . .. :.
CELF45 QVVKYHSNIPMSPLTTHRLL--TVKRKILVLDLDETLIH-SHHDGVL--RQTVKPGT-PS
            40        50          60        70           80        

         240       250            260       270        280         
MPL12. DRAESEVAEDFDPQLF-IKNQPE----LSDVVSNYWPRDTLRKKSVTLV-LDLDDILDPD
       : .  .:. :  :  : ....:.    :: :::. : . ..   :. .   .. : ::  
CELF45 DFT-IRVVIDRHPVKFSVHERPHVDYFLS-VVSQ-WYELVVFTASMEVYGTSVADRLD-R
        90        100       110         120       130       140    

     290        300       310       320       330        340       
MPL12. GK-FISQRFYRDSCILLDGIYTKDLTVLGLDLAKVAIIDNCPQVYRLQI-NNGIPIKSWY
       :. ....:..:. : .  : :::::...  ::... :.:: : .:: .. .:.::: ::.
CELF45 GRGILKRRYFRQHCTMEVGGYTKDLSAIHPDLSSICILDNSPGAYR-KFPHNAIPIPSWF
           150       160       170       180        190       200  

       350       360       370       380           
MPL12. DDPTDDGLITILPFLETLAVADDVRPIIGRRFGNKE        
       .::.:  :...::::..:  ..::: ...:              
CELF45 SDPNDTCLLNLLPFLDALRFTSDVRSVLSRNMQALPETQSVQYY
            210       220       230       240      

Library scan:  0:00:00  total CPU time:  0:00:00