SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MOK9.P6 (Universal genetic code) : 39 aa
 vs  library
 searching tm021b043 library

   1609 residues in     1 sequences
The best scores are:                              s-w
TM021B043, 1609 bases, 1FA0 checksum.              (1609) 131

>>TM021B043, 1609 bases, 1FA0 checksum.              (1609 aa)
Smith-Waterman score: 131;   47.500% identity in 40 aa overlap

TM021B MDWNKEEACRAKTLAEDKMKEGDFVGAQKLLLKAQSLFSGLESLPQMLAVCDVHNSAEKK
               10        20        30        40        50        60

TM021B INCLENWYGILQVMHFADDATIKKQVRKLALLLHPDKNQFPGAEAAFKLVWDASRFLADK
               70        80        90       100       110       120

TM021B DKRSQYDIRRRIYLRLATNQLNANSGLQCAATNSATDTFWTCCEHCGYRYKYLRKYVNIL
              130       140       150       160       170       180

TM021B LNCNICQRSYMAYDTGFNEAPSKSNTGQKEVQNQGPCNTSLNTNGESIGAQPGSVAAEVD
              190       200       210       220       230       240

TM021B KKGTFNKKFNKRNGGGESKKTEVKNSKIETEFVRNDDEEKMKSAAKLHKPHPEVTEPEIG
              250       260       270       280       290       300

TM021B ASKSVPDESVSRSDEAPSTSKDKNKMKKGVEESINVDGSDFIKDKAYSKDNNKRKSPRRS
              310       320       330       340       350       360

TM021B QQSSYAEEEKISDNSLGPPKKRLRSNVGLKSEQTTRKGLVGVGSSKRFDSGGGSSAPSCA
              370       380       390       400       410       420

TM021B FKRKAKKFVDSGYQEISSVKDKEREVRKASGEGVVMEAKIDNNHNPNENLITEDLPDPEF
              430       440       450       460       470       480

TM021B SNFELTTSCFGVNQVWSMYDPIDGMPRLYARIDKVLVPEFKLWITWIDPLQDNKDNSIPI
              490       500       510       520       530       540

TM021B ACGIFQGGGSEEENDHLKFSCQMFHLTRNNSVVIYPRKGEIWAIFRGWDISWSASSENHK
              550       560       570       580       590       600

TM021B HPYEYDFVEVLSNFNDENGLGVGFLGKVEGFVSLFRQDAQDGVLQLQIPPSQMLRFSHKV
              610       620       630       640       650       660

TM021B PSFKMTGKEREGVPPGCFELDPAALPKELFEVYDSKVDVGLDRELPNGKTGGPFPEASKV
              670       680       690       700       710       720

TM021B EMQANTTRESSPFKKKRPKVHDNHGSFSKESDGRRTNHERNSAKESRKSVKAVDALNLRK
              730       740       750       760       770       780

TM021B SPRLLSETNSQANSRSGRQIAEKKSANNGESCGKPGGLSLSGEKMSEKTITRMRKTPQDI
              790       800       810       820       830       840

TM021B HKPTVNVKKHGRNDESLSQSRGDGLLTQLNGNMKSSEPETRVPSSCKTVKENTFNFENQR
              850       860       870       880       890       900

TM021B SWDKFQIDQIWAIYSNDKGSPRKYAQIKKIDTSPEFKLHVAPLELYRPPIHMPRPVCCGR
              910       920       930       940       950       960

TM021B FKLKTGKAEVYVPSSFSHQVKAVKTKKNRFEVYPGKGEIWALYKNCNTRDYTETEELEIV
              970       980       990      1000      1010      1020

TM021B EVVETDEQRIQAMTLTAKGFNNKPLYRRSEESNASFIMERNLCEEDDSDVDIMLLMVVGS
             1030      1040      1050      1060      1070      1080

TM021B VDAYESQIPRPMRRQITKKGHAYIQKALKDDPIHFRQLYRMNPEVFAELCHLLQMKTGLK
             1090      1100      1110      1120      1130      1140

TM021B GTPHVCVEEMVATFLITVGQNSRYCHTMDTFKRSKFSTSINFHKVLRALNMLAPTLMAKV
             1150      1160      1170      1180      1190      1200

TM021B TNTVPSKISKTTRFYPYFKDCVGAIDGTHINAMVQGPEKASYRNRKGVISQNVLAACNFD
             1210      1220      1230      1240      1250      1260

TM021B LEFIYVLSGWEGSAHDSKVLQDALTRRTNRLQVPEGNRLQVLKGITMGDSQPKKRKKGDY
             1270      1280      1290      1300      1310      1320

TM021B NPWSPEETKLLVQLLVEGINNNWRDSNGTISKLTVETKFMPEINKEFCRSKNYNHYLSRM
             1330      1340      1350      1360      1370      1380

TM021B KYLKIQYQSCLDLQRFSSGFGWDPLTKRFTASDEVWSDYLKAHPNNKQLRYDTFEFFDEL
             1390      1400      1410      1420      1430      1440

TM021B QIIFGEGVATGKNAIGLCDSTDGLTYRAGENPRKEYVDDFDNVYEYDTTTHHESSEHYAP
             1450      1460      1470      1480      1490      1500

TM021B FMSHGTSESPKLPPRKRTRSERSTSQKEESPMMVVSSKILDIIQQREERQQNEVAQKKNN
             1510      1520      1530      1540      1550      1560

                        10        20        30          
MOK9.P         SNFNH-IRYKAVTSIHSLGMKNVLIDMSVEERFGLIKNLL 
               :.... :::::.:.:. ::...:...::::::.: :.... 
TM021B VWDAIKEISDLDECIRYKALTKIYHLGIQDVFVSMSVEERLGWIQTIME
             1570      1580      1590      1600         

Library scan:  0:00:00  total CPU time:  0:00:00