SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MOK9.P1 (Universal genetic code) : 171 aa
 vs  library
 searching ac00010323 library

    413 residues in     1 sequences
The best scores are:                              s-w
AC00010323, 413 bases, 3B7 checksum.               (413) 757

>>AC00010323, 413 bases, 3B7 checksum.               (413 aa)
Smith-Waterman score: 757;   67.045% identity in 176 aa overlap

AC0001 MTAAFRMLAYGVPADSTDEYIKIGESTALESLKRFCRAIVEVFACRYLRSPDANDVARLL
               10        20        30        40        50        60

                                              10        20         
MOK9.P                                QFLGRSGSPTIILEAIAYYDLWI-HAYFG
                                      :. ::: ::::::::.: ::::: :::::
AC0001 HIGESRGFPRMLGSLDCMHWKWKNCPTAWGGQYAGRSRSPTIILEAVADYDLWIWHAYFG
               70        80        90       100       110       120

       30         40        50        60        70        80       
MOK9.P MPINSNN-INVLKESNLFSKLSQCIAPPANYIIQGKKYNMGYYLDDGIYPKWP-IVQTIS
       .: .::: ::::. :.::..:..  ::::.:.:. : :::.::: :::::::  .:::: 
AC0001 LP-GSNNDINVLEASHLFANLAEGTAPPASYVINEKPYNMSYYLADGIYPKWSTLVQTIH
               130       140       150       160       170         

         90       100       110       120       130        140     
MOK9.P NPQSPKKKMFAAKQEACRKDVERVFRVLQSKFAIIARSSNCWKK-VLHDIMSTCIIMHNM
       .:..::::.:: :::::::::::.: ::::.:::.:  :  :.: ::::::..:::::::
AC0001 DPRGPKKKLFAMKQEACRKDVERAFGVLQSRFAIVAGPSRLWNKTVLHDIMTSCIIMHNM
     180       190       200       210       220       230         

         150       160        170                                  
MOK9.P IIEDECDINTLIREERSS-PKVTVEMT                                 
       ::::: ::.. : :::   :   ::::                                 
AC0001 IIEDERDIDAPI-EERVEVPIEEVEMTGETTIDVIKRCSSSLYKNFSPIDTMLDWPPENP
     240       250        260       270       280       290        

AC0001 FEHSKLLNYYELQEDNDWIRLYLELAVATTNRGTIRDLDDLSNLKIIQVAIDTTPQDVDL
      300       310       320       330       340       350        

AC0001 VFNRTYFAIVYIQYKDSCEARVGKDVDRVAIVRRAFDEQRGCFSLVGKTLRLPKE
      360       370       380       390       400       410   

Library scan:  0:00:00  total CPU time:  0:00:00