SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MOJ9.23 (Universal genetic code) : 263 aa
 vs  library
 searching ac00232911 library

    261 residues in     1 sequences
The best scores are:                              s-w
AC00232911, 261 bases, 222D checksum.              (261)1719

>>AC00232911, 261 bases, 222D checksum.              (261 aa)
Smith-Waterman score: 1719;   98.855% identity in 262 aa overlap

               10        20        30        40        50        60
MOJ9.2 MQARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYR
       : ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
AC0023 M-ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYR
                10        20        30        40        50         

               70        80        90       100       110       120
MOJ9.2 EVISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
AC0023 EVISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEA
      60        70        80        90       100       110         

              130       140       150       160       170       180
MOJ9.2 KFKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
AC0023 KFKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGN
     120       130       140       150       160       170         

              190       200       210       220       230       240
MOJ9.2 VVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
AC0023 VVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLP
     180       190       200       210       220       230         

              250       260   
MOJ9.2 KGKGIKLTIIEEARKRLASQQAA
       :::::::::::::::::..::: 
AC0023 KGKGIKLTIIEEARKRLSAQQA 
     240       250       260  

Library scan:  0:00:00  total CPU time:  0:00:00