SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MOJ9.13 (Universal genetic code) : 330 aa
 vs  library
 searching s48122 library

    324 residues in     1 sequences
The best scores are:                              s-w
S48122, 324 bases, 1E47 checksum.                  (324)2062

>>S48122, 324 bases, 1E47 checksum.                  (324 aa)
Smith-Waterman score: 2062;   99.383% identity in 324 aa overlap

               10        20        30        40        50        60
MOJ9.1 MGDTSPRTSVSTDGDTDHNNLMFDEGHLGIGASDSSDRSKSKMDQKTLRRLAQNREAARK
             ::::::::::::::::::::::::::::::::::::::::::::::::::::::
S48122       RTSVSTDGDTDHNNLMFDEGHLGIGASDSSDRSKSKMDQKTLRRLAQNREAARK
                     10        20        30        40        50    

               70        80        90       100       110       120
MOJ9.1 SRLRKKAYVQQLENSRLKLTQLEQELQRARQQGVFISSSGDQAHSTAGDGAMAFDVEYRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
S48122 SRLRKKAYVQQLENSRLKLTQLEQELQRARQQGVFISSSGDQAHSTAGDGAMAFDVEYRR
           60        70        80        90       100       110    

              130       140       150       160       170       180
MOJ9.1 WQEDKNRQMKELSSAIDSHATDSELRIIVDGVIAHYEELYRIKGNAAKSDVFHLLSGMWK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
S48122 WQEDKNRQMKELSSAIDSHATDSELRIIVDGVIAHYEELYRIKGNAAKSDVFHLLSGMWK
          120       130       140       150       160       170    

              190       200       210       220       230       240
MOJ9.1 TPAERCFLWLGGFRSSELLKLIASQLEPLTEQQSLDINNLQQSSQQAEDALSQGMDNLQQ
       ::::::::::::::::::::::: :::::::::::::::::::.::::::::::::::::
S48122 TPAERCFLWLGGFRSSELLKLIACQLEPLTEQQSLDINNLQQSTQQAEDALSQGMDNLQQ
          180       190       200       210       220       230    

              250       260       270       280       290       300
MOJ9.1 SLADTLSSGTLGSSSSGNVASYMGQMAMAMGKLGTLEGFIRQADNLRLQTYQQMVRLLTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
S48122 SLADTLSSGTLGSSSSGNVASYMGQMAMAMGKLGTLEGFIRQADNLRLQTYQQMVRLLTT
          240       250       260       270       280       290    

              310       320       330
MOJ9.1 RQSARALLAVHNYTLRLRALSSLWLARPRE
       ::::::::::::::::::::::::::::::
S48122 RQSARALLAVHNYTLRLRALSSLWLARPRE
          300       310       320    

Library scan:  0:00:00  total CPU time:  0:00:00