SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MNC6.P1 (Universal genetic code) : 100 aa
 vs  library
 searching atac0023434 library

    430 residues in     1 sequences
The best scores are:                              s-w
ATAC0023434, 430 bases, F0C checksum.              (430) 373

>>ATAC0023434, 430 bases, F0C checksum.              (430 aa)
Smith-Waterman score: 373;   46.281% identity in 121 aa overlap

ATAC00 MGTRAERKEDFVGGFGFGVVENSHKDVMVLPHHHYYPSYSSPSSSSLCYCSAGVSDPMFS
               10        20        30        40        50        60

                                                                   
MNC6.P                                                    FTNAQLKEL
                                                          :..:: .::
ATAC00 VSSNQAYTSSHSGMFTPAGSGSAAVTVADPFFSLSSSGEMRRSMNEDAGAAFSEAQWHEL
               70        80        90       100       110       120

      10        20        30                             40        
MNC6.P ERQAMIYKYMIASIPVPFDLLVSSP----SSASP-----------------CNNKNIAGD
       :::  :::::.::.::: .::.  :    :...:                  . .: ..:
ATAC00 ERQRNIYKYMMASVPVPPELLTPFPKNHQSNTNPDVTVAVATGGSLQLGIASSASNNTAD
              130       140       150       160       170       180

       50        60        70        80        90       100        
MNC6.P LEPGRCRRTDGKKWRCAKEVVSNHKYCEKHLHRGRPRSRKHVEPPYSRPNNN        
       ::: ::.:::::::::...:. ..::::.: :..:::::::::  ..  ..:        
ATAC00 LEPWRCKRTDGKKWRCSRNVIPDQKYCERHTHKSRPRSRKHVESSHQSSHHNDIRTAKND
              190       200       210       220       230       240

ATAC00 TSQLVRTYPQFYGQPISQIPVLSTLPSASSPYDHHRGLRWFTKEDDAIGTLNPETQEAVQ
              250       260       270       280       290       300

ATAC00 LKVGSSRELKRGFDYDLNFRQKEPIVDQSFGALQGLLSLNQTPQHNQETRQFVVEGKQDE
              310       320       330       340       350       360

ATAC00 AMGSSLTLSMAGGGMEETEGTNQHQWVSHEGPSWLYSTTPGGPLAEALCLGVSNNPSSST
              370       380       390       400       410       420

ATAC00 TTSSCSRSSS
              430

Library scan:  0:00:00  total CPU time:  0:00:00