SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MNC6.15 (Universal genetic code) : 89 aa
 vs  library
 searching atfca06 library

    834 residues in     1 sequences
The best scores are:                              s-w
ATFCA06, 834 bases, 2F6 checksum.                  (834) 170

>>ATFCA06, 834 bases, 2F6 checksum.                  (834 aa)
Smith-Waterman score: 170;   39.130% identity in 92 aa overlap

ATFCA0 MEEDRESRVSAKPSGDRVDRLRNLPDCLLFKILLNLPTKDVVKLSVLSRRWRNVWRYVPG
               10        20        30        40        50        60

ATFCA0 FNSESCLQKFKLTVNWYDDVQLETVHFTEWFNAVVKRKVQHLHILDKTWGRDEVVIPPTV
               70        80        90       100       110       120

ATFCA0 FTCGSLISLNLYDVYLPNREFVSLPSLKVIVLDAVVFDEDFAFEMLVSGCPVLESLSVNK
              130       140       150       160       170       180

                                                                   
MNC6.1                                                MKYFV----SEIL
                                                         ::    :: .
ATFCA0 INLNDISENDDDYLEVVIDAPRLHYLKLNDKRTASFIMKNHGSLLKADIDFVFNLGSEYM
              190       200       210       220       230       240

         10        20         30        40        50        60     
MNC6.1 ---SHLSTDDAVRTSLLS-TRWRYLWQSVPGLDLICKYSELESLPRFGYMSRLHVTLCIY
          ..: :   .:  :.. .  . .  :   :..:  ::. :.:: :  .: :.: .   
ATFCA0 FDPNYLPTRHIIRDFLVGLSGVKDMIISSSTLQVIYDYSRCEQLPLFRNVSFLRVEFA--
              250       260       270       280       290          

            70        80                                           
MNC6.1 DLKW--LPTFLESCPNLKSLILVMIY                                  
       : .:  :: :::::::::::.:                                      
ATFCA0 DYRWEMLPIFLESCPNLKSLVLGFSIPPGKEGANILPGPRRFLTSLEYVKIAKPMAAEAS
      300       310       320       330       340       350        

ATFCA0 EIKLKLVNSTMNGALGNSSASVSGGEGAGGPAPFLVKTYEMVDDSSTDQIVSWSANNNSF
      360       370       380       390       400       410        

ATFCA0 IVWNHAEFSRLLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFLNDDFIKDQKHLLKNI
      420       430       440       450       460       470        

ATFCA0 HRRKPIHSHSHPPASSTDQERAVLQEQMDKLSREKAAIEAKLLKFKQQKVVAKHQFEEMT
      480       490       500       510       520       530        

ATFCA0 EHVDDMENRQKKLLNFLETAIRNPTFVKNFGKKVEQLDISAYNKKRRLPEVEQSKPPSED
      540       550       560       570       580       590        

ATFCA0 SHLDNSSGSSRRESGNIFHQNFSNKLRLELSPADSDMNMVSHSIQSSNEEGASPKGILSG
      600       610       620       630       640       650        

ATFCA0 GDPNTTLTKREGLPFAPEALELADTGTCPRRLLLNDNTRVETLQQRLTSSEETDGSFSCH
      660       670       680       690       700       710        

ATFCA0 LNLTLASAPLPDKTASQIAKTTLKSQELNFNSIETSASEKNRGRQEIAVGGSQANAAPPA
      720       730       740       750       760       770        

ATFCA0 RVNDVFWEQFLTERPGSSDNEEASSTYRGNPYEEQEEKRNGSMMLRNTKNIEQLTL
      780       790       800       810       820       830    

Library scan:  0:00:00  total CPU time:  0:00:00