SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MNC6.12 (Universal genetic code) : 122 aa
 vs  library
 searching tm018a109 library

    122 residues in     1 sequences
The best scores are:                              s-w
TM018A109, 122 bases, A2C checksum.                (122) 436

>>TM018A109, 122 bases, A2C checksum.                (122 aa)
Smith-Waterman score: 436;   50.833% identity in 120 aa overlap

                     10        20        30        40        50    
MNC6.1     MVFKFH--FHVPHLHILPHHHHHHHHDVPKGCVAIMVGHEDDEEGLHRFVVPLVFL
                :  ::.:.::    ::.: :. :::::.:. ::. ...:   :::.:....
TM018A MGNGDKVMSHWSFHIPRLH----HHEHDHEKVPKGCLAVKVGQGEEQE---RFVIPVMYF
               10            20        30        40           50   

           60        70        80        90       100       110    
MNC6.1 SHPLFLDLLKEAEKEYGFKHDGPITIPCGVDEFKHVQEVIDEETHRRHSHGGHGHNNHNH
       .:::: .::::::.:.:: . : ::::: :.::..:: .::.: . :   : .  ..:.:
TM018A NHPLFGQLLKEAEEEFGFAQKGTITIPCHVEEFRYVQGLIDRE-NTRFL-GTNLLDHHHH
            60        70        80        90        100        110 

           120    
MNC6.1 HNNHL-RCF  
       :.::: :::  
TM018A HHNHLIRCFRV
             120  

Library scan:  0:00:00  total CPU time:  0:00:00