SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MNC17.P4 (Universal genetic code) : 45 aa
 vs  library
 searching gi:3785979 library

    295 residues in     1 sequences
The best scores are:                              s-w
gi|3785979                                         (295) 231

>>gi|3785979                                         (295 aa)
Smith-Waterman score: 231;   72.727% identity in 44 aa overlap

gi|378 MGYISNNNLINYLPLSTTQPPLLLTHCNKILTSSFIDLIHINVLIFLFFSGDINGNDHHQ
               10        20        30        40        50        60

                                                 10        20      
MNC17.                                   LLENLYKEGIRTPSADQIQQITGRLR
                                          ::.::. : :::...:::::...::
gi|378 LITASSGEHDIDERKNNIPAAATLRWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLR
               70        80        90       100       110       120

         30        40                                              
MNC17. AYGHIEGKNVFYWFQNHKA                                         
        ::.:::::::::::::::                                         
gi|378 KYGRIEGKNVFYWFQNHKARERLKRRRREGGAIIKPHKDVKDSSSGGHRVDQTKLCPSFP
              130       140       150       160       170       180

gi|378 HTNRPQPQHELDPASYNKDNNANNEDHGTTEESDQRASEVGKYATWRNLVTWSITQQPEE
              190       200       210       220       230       240

gi|378 INIDENVNGEEEETRDNRTLNLFPVREYQEKTGRLIEKTKACNYCYYYEFMPLKN
              250       260       270       280       290     

Library scan:  0:00:00  total CPU time:  0:00:00